RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	EVA1B	Q9NVM1	165 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	SMPD4	Q9NXE4	827 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	CPNE7	Q9UBL6	633 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	ENOPH1	Q9UHY7	261 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	PHF11	Q9UIL8	331 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	RAB23	Q9ULC3	237 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	TMCC3	Q9ULS5	477 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	HRH3	Q9Y5N1	445 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306		V9GYH0	126 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306	CEP350	Q5VT06	3117 aa		10.45	□□□□□ -0.74
CHD2-223	ENST00000636306		A0A0B4J293	547 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306		A0A1W2PQ09	198 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CARNS1	A5YM72	827 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306		F5H423	210 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306		I6L893	689 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ANKRD28	O15084	1053 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	FKTN	O75072	461 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	LDOC1	O95751	146 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RET	P07949	1114 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	IL1RN	P18510	177 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	BTF3	P20290	206 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	GRK4	P32298	578 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	BMP8B	P34820	402 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RECQL	P46063	649 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ARHGDIA	P52565	204 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RRAS2	P62070	204 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	LAPTM5	Q13571	262 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CAMK1	Q14012	370 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	GBX1	Q14549	363 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MBTPS1	Q14703	1052 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SYT16	Q17RD7	645 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	TRIM60	Q495X7	471 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SPESP1	Q6UW49	350 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CYHR1	Q6ZMK1	362 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	TMPRSS11A	Q6ZMR5	421 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	BMP8A	Q7Z5Y6	402 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SCD5	Q86SK9	330 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	NPAS4	Q8IUM7	802 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	DPP10	Q8N608	796 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ATAD1	Q8NBU5	361 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ACVR1C	Q8NER5	493 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RNF31	Q96EP0	1072 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ZNF416	Q9BWM5	594 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	FSD1L	Q9BXM9	530 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	BEX2	Q9BXY8	128 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ZYG11B	Q9C0D3	744 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	LDAH	Q9H6V9	325 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	LTB4R2	Q9NPC1	389 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ING4	Q9UNL4	249 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	NEU3	Q9UQ49	428 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	GMPPB	Q9Y5P6	360 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ACTL7A	Q9Y615	435 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MROH6	A6NGR9	719 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306		A8MT66	165 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	KHNYN	O15037	678 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MOCS2	O96007	188 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	APOC1	P02654	83 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	PROS1	P07225	676 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ARSA	P15289	507 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ITGAL	P20701	1170 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RPS3	P23396	243 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RENBP	P51606	427 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	DGKQ	P52824	942 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RAB14	P61106	215 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RING1	Q06587	406 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MRPL58	Q14197	206 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RCAN2	Q14206	197 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	FAM83E	Q2M2I3	478 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	PROX2	Q3B8N5	592 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	TECRL	Q5HYJ1	363 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	PCID2	Q5JVF3	399 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	FAM171A1	Q5VUB5	890 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	AFMID	Q63HM1	303 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	LHX8	Q68G74	356 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CFAP77	Q6ZQR2	320 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CTU1	Q7Z7A3	348 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	TMC8	Q8IU68	726 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	PHYKPL	Q8IUZ5	450 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC41A1	Q8IVJ1	513 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	TMEM151B	Q8IW70	566 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ARHGAP12	Q8IWW6	846 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	UMODL1-AS1	Q8N2C9	162 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	L3HYPDH	Q96EM0	354 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC47A1	Q96FL8	570 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CELF6	Q96J87	481 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	FOPNL	Q96NB1	174 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SORCS2	Q96PQ0	1159 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MLPH	Q9BV36	600 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	GSTO2	Q9H4Y5	243 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SYNDIG1	Q9H7V2	258 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	SP110	Q9HB58	689 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	CYP4F12	Q9HCS2	524 aa		10.44	□□□□□ -0.74

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