RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NUDT22Q9BRQ3 303 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 KLHL25Q9H0H3 589 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 GSTO2Q9H4Y5 243 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 ZBTB26Q9HCK0 441 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 ARL8BQ9NVJ2 186 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 TAS2R1Q9NYW7 299 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 NKX1-2Q9UD57 310 aaPredicted RBP13.9□□□□□ -0.19
LINC00339-208ENST00000634934 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.19
LINC00339-208ENST00000634934 SPTBN2O15020 2390 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 RP1P56715 2156 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 A0A0G2JND7 137 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 E7EQ34 232 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 PPP6CO00743 305 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 FCHO1O14526 889 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 RFPL3O75679 317 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CPNE6O95741 557 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 MLYCDO95822 493 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 ESRRAP11474 423 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 HOXB3P14651 431 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 EPORP19235 508 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CDH3P22223 829 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 GRK2P25098 689 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 NAA20P61599 178 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 ABATP80404 500 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 BST1Q10588 318 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 LCP2Q13094 533 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 STX3Q13277 289 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 TAF11Q15544 211 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 SLC5A12Q1EHB4 618 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 TRMT5Q32P41 509 aaKnown RBP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 XKR6Q5GH73 641 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CATSPEREQ5SY80 951 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 KIAA1614Q5VZ46 1190 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 WDR74Q6RFH5 385 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 DGLUCYQ7Z3D6 616 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 NET1Q7Z628 596 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 ADCK2Q7Z695 626 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 TMPRSS11BQ86T26 416 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 MYLK4Q86YV6 388 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CRLF3Q8IUI8 442 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CNDP1Q96KN2 507 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 MAP3K3Q99759 626 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CCDC28BQ9BUN5 200 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 SHCBP1LQ9BZQ2 653 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 TWSG1Q9GZX9 223 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 RAB33BQ9H082 229 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 ACTR8Q9H981 624 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CUEDC1Q9NWM3 386 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-208ENST00000634934 GPRC5BQ9NZH0 403 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 TMEM9Q9P0T7 183 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 DCTN4Q9UJW0 460 aa13.89□□□□□ -0.19
LINC00339-208ENST00000634934 CACNA1AO00555 2505 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 PCNX2A6NKB5 2137 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 A0A0J9YY10 115 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 H7BY64 318 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 OR7A17O14581 309 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 NPHS1O60500 1241 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 CEACAM1P13688 526 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 PVRP15151 417 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 VARSP26640 1264 aaKnown RBP13.88□□□□□ -0.19
LINC00339-208ENST00000634934 LSSP48449 732 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 PTDSS1P48651 473 aaKnown RBP13.88□□□□□ -0.19
LINC00339-208ENST00000634934 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-208ENST00000634934 IRF8Q02556 426 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 CHIT1Q13231 466 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 ILKQ13418 452 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 SQSTM1Q13501 440 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 SPIDRQ14159 915 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 RCN2Q14257 317 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 CES4AQ5XG92 561 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 NXPE4Q6UWF7 544 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 DCBLD1Q8N8Z6 715 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 OR52B6Q8NGF0 335 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 PRAP1Q96NZ9 151 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 CDK15Q96Q40 435 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 DPH7Q9BTV6 452 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 SLC6A20Q9NP91 592 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 MID1IP1Q9NPA3 183 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 TAGLN3Q9UI15 199 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 LRCH1Q9Y2L9 728 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 WDFY3Q8IZQ1 3526 aa13.88□□□□□ -0.19
LINC00339-208ENST00000634934 TLCD2A6NGC4 264 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 A8MU76 341 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 TMEM114B3SHH9 223 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 LYPLA1O75608 230 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-208ENST00000634934 HSPA4LO95757 839 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 OTCP00480 354 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 CHRNGP07510 517 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 RPSAP08865 295 aaKnown RBP13.87□□□□□ -0.19
LINC00339-208ENST00000634934 MAGP20916 626 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 SERPINB5P36952 375 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 GRIA3P42263 894 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 SLC1A6P48664 564 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 CCR8P51685 355 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 ABCE1P61221 599 aaKnown RBP13.87□□□□□ -0.19
LINC00339-208ENST00000634934 SLC34A1Q06495 639 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 NAA25Q14CX7 972 aa13.87□□□□□ -0.19
LINC00339-208ENST00000634934 ARL13AQ5H913 290 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms