RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 GPR20Q99678 358 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SULT4A1Q9BR01 284 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 PBDC1Q9BVG4 233 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 IFNA5P01569 189 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CYP11A1P05108 521 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC16A9Q7RTY1 509 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 ARL14Q8N4G2 192 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 MTERF1Q99551 399 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 MAPKAP1Q9BPZ7 522 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 FEM1AQ9BSK4 669 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 STRA6Q9BX79 667 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 FBP2O00757 339 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CCL16O15467 120 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 LGR5O75473 907 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 H1F0P07305 194 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 NELFEP18615 380 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CDK2P24941 298 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 RPL26P61254 145 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 FOXRED2Q8IWF2 684 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 GPR88Q9GZN0 384 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 RBMX2Q9Y388 322 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 TLR4O00206 839 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SSX5O60225 188 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 B4GALT4O60513 344 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC19A2O60779 497 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 EOMESO95936 686 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC15A1P46059 708 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 MLC1Q15049 377 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 BRAT1Q6PJG6 821 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 WFIKKN2Q8TEU8 576 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 OR5B12Q96R08 314 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 TREHO43280 583 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC29A3Q9BZD2 475 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 POU4F2Q12837 409 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CMC1Q7Z7K0 106 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 RBM15BQ8NDT2 890 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 NMUR2Q9GZQ4 415 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 PTGES2Q9H7Z7 377 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 MEIS2O14770 477 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 TRAPPC6AO75865 159 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 GP1BBP13224 206 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 GSTM2P28161 218 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 AMZ1Q400G9 498 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 ARL9Q6T311 187 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 LNX2Q8N448 690 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CERS5Q8N5B7 392 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 LSM14AQ8ND56 463 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 LRRC4CQ9HCJ2 640 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 KCNMB3Q9NPA1 279 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SIRPGQ9P1W8 387 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 LGALS13Q9UHV8 139 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 RIMKLBQ9ULI2 386 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 LOC100509620A0A075B734 347 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 TMEM150BA6NC51 233 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 M0R233 179 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CBSLP0DN79 551 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 HTR2AP28223 471 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 FMO3P31513 532 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CBSP35520 551 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC5A3P53794 718 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 NFE2L1Q14494 772 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 CAMKVQ8NCB2 501 aa12.85□□□□□ -0.35
SYNGAP1-208ENST00000629380 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 USP2O75604 605 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 MT-CYBP00156 380 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 GLDCP23378 1020 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 MAN2A2P49641 1150 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 ERVK-8P63133 956 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 RIN1Q13671 783 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 CLEC6AQ6EIG7 209 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 FCAMRQ8WWV6 532 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 MYOCQ99972 504 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 PARPBPQ9NWS1 579 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 ZNFX1Q9P2E3 1918 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 MT-CO2P00403 227 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 ADH6P28332 368 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 BMP8BP34820 402 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 KLF10Q13118 480 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 BMP8AQ7Z5Y6 402 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 NLGN3Q9NZ94 848 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 ABCA1O95477 2261 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 SYNGR4O95473 234 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 IFNA10P01566 189 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 RPL7AP62424 266 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 AGAP5A6NIR3 686 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 MYOM1P52179 1685 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 CLEC12AQ5QGZ9 265 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 OR7D4Q8NG98 312 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 MOAP1Q96BY2 351 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 METTL7AQ9H8H3 244 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 C13orf42A0A1B0GVH6 325 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 GKN3PP0CG01 181 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 MAGP20916 626 aa12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 TNFAIP8L2Q6P589 184 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-208ENST00000629380 LCLAT1Q6UWP7 414 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms