RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 DLEU7Q6UYE1 221 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 VN1R5Q7Z5H4 357 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 SLC15A3Q8IY34 581 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 RNF175Q8N4F7 328 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 PJA1Q8NG27 643 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 OR2A1Q8NGT9 310 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 SLC13A3Q8WWT9 602 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 STARD8Q92502 1023 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 STMN2Q93045 179 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 APOLD1Q96LR9 279 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 MTERF1Q99551 399 aaKnown RBP12.46□□□□□ -0.41
RAB5B-211ENST00000628569 AIF1LQ9BQI0 150 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 SARGQ9BW04 601 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 TMEM168Q9H0V1 697 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 TBC1D17Q9HA65 648 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 ZNF624Q9P2J8 865 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-211ENST00000628569 STX18Q9P2W9 335 aaKnown RBP12.46□□□□□ -0.41
RAB5B-211ENST00000628569 NKX1-2Q9UD57 310 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-211ENST00000628569 MAN2B2Q9Y2E5 1009 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 PCDHB11Q9Y5F2 797 aa12.46□□□□□ -0.41
RAB5B-211ENST00000628569 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 FAM86C2PA6NEL3 165 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 METTL12A8MUP2 240 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 NME4O00746 187 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 KRT36O76013 467 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 MYO1DO94832 1006 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 SEMA3DO95025 777 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 EML2O95834 649 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 PGRP06401 933 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 THEGLP0DJG4 465 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 PRPS1L1P21108 318 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 TACR1P25103 407 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 CD27P26842 260 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 AK4P27144 223 aaPredicted RBP12.45□□□□□ -0.42
RAB5B-211ENST00000628569 GSTM2P28161 218 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 TIA1P31483 386 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB5B-211ENST00000628569 SHMT2P34897 504 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 ACTR1BP42025 376 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 ASMTP46597 345 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 SLC7A2P52569 658 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 EEFSECP57772 596 aaKnown RBP12.45□□□□□ -0.42
RAB5B-211ENST00000628569 ACTR1AP61163 376 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 NFYCQ13952 458 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 TRIM25Q14258 630 aaKnown RBP12.45□□□□□ -0.42
RAB5B-211ENST00000628569 FZD2Q14332 565 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 FXNQ16595 210 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 LAYNQ6UX15 382 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 CAMKMTQ7Z624 323 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 DHDDSQ86SQ9 333 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 IQCHQ86VS3 1027 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 METTL4Q8N3J2 472 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 EFCAB3Q8N7B9 438 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB5B-211ENST00000628569 GTF2H4Q92759 462 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 TMEM125Q96AQ2 219 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 CCDC124Q96CT7 223 aaKnown RBP12.45□□□□□ -0.42
RAB5B-211ENST00000628569 TPSD1Q9BZJ3 242 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 CUEDC1Q9NWM3 386 aaPredicted RBP12.45□□□□□ -0.42
RAB5B-211ENST00000628569 CMTM6Q9NX76 183 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 ADA2Q9NZK5 511 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 OR6C2Q9NZP2 312 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 KLF15Q9UIH9 416 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 NEUROG3Q9Y4Z2 214 aa12.45□□□□□ -0.42
RAB5B-211ENST00000628569 TRBV5-3A0A0A0MS03 114 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 OR5K4A6NMS3 321 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 DNAJA2O60884 412 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 CCNDBP1O95273 360 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 TBX6O95947 436 aaPredicted RBP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 HOXB9P17482 250 aaPredicted RBP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 HRH2P25021 359 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 PTX3P26022 381 aaPredicted RBP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 PEBP1P30086 187 aaKnown RBP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 DGKQP52824 942 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 AP2B1P63010 937 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 CSNK1G2P78368 415 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 MS4A2Q01362 244 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 ILF3Q12906 894 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 BNIP2Q12982 314 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 TSTA3Q13630 321 aaPredicted RBP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 DDX39BQ13838 428 aaKnown RBP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 FLOT2Q14254 428 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 KRT33BQ14525 404 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 RCN1Q15293 331 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 FAM174BQ3ZCQ3 159 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 SPANXN4Q5MJ08 99 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 LRIF1Q5T3J3 769 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 SLC2A7Q6PXP3 512 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 HID1Q8IV36 788 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 KIAA2013Q8IYS2 634 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 KRTCAP2Q8N6L1 136 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 C1orf52Q8N6N3 182 aaKnown RBP12.44□□□□□ -0.42
RAB5B-211ENST00000628569 FRMD1Q8N878 549 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 MFSD2AQ8NA29 543 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 ZNF740Q8NDX6 193 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 OR8J2Q8NGG1 315 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 CCL4L1Q8NHW4 92 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 SH3KBP1Q96B97 665 aa12.44□□□□□ -0.42
RAB5B-211ENST00000628569 CXorf40BQ96DE9 158 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms