RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 TNKS2Q9H2K2 1166 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 ZNF556Q9HAH1 456 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 NT5MQ9NPB1 228 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 TRMT13Q9NUP7 481 aaKnown RBP4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 TMEM248Q9NWD8 314 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 MRPL39Q9NYK5 338 aaKnown RBP4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 PDP1Q9P0J1 537 aaPredicted RBP4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 IKZF3Q9UKT9 509 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 NUP50Q9UKX7 468 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 PIN4Q9Y237 131 aaKnown RBP4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 GPSM3Q9Y4H4 160 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 IPPQ9Y573 584 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 PCDHB5Q9Y5E4 795 aa4.05□□□□□ -1.76
PTP4A1-205ENST00000626021 MTCL1Q9Y4B5 1905 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 IQCMA0A1B0GVH7 501 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 LINC00862A6NCI5 91 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 KRT87PA6NCN2 255 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 MYADML2A6NDP7 307 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 EFCAB10A6NFE3 127 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ZSCAN5BA6NJL1 495 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 E9PAM4 449 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 OR7A17O14581 309 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CTDSP2O14595 271 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 PTGESO14684 152 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 BET1O15155 118 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 KIAA0513O60268 411 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 PDE9AO76083 593 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 EPN2O95208 641 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 LGI1O95970 557 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 F12P00748 615 aaPredicted RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 HMBSP08397 361 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ACADMP11310 421 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 PIPP12273 146 aaPredicted RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ANXA8P13928 327 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC2A4P14672 509 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ACPPP15309 386 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ZNF30P17039 623 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 MAGP20916 626 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 PRPH2P23942 346 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 PTBP1P26599 531 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 PTPN6P29350 595 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 KDELR2P33947 212 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CA5AP35218 305 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 AGTR2P50052 363 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 HTR6P50406 440 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 IL2P60568 153 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GPLD1P80108 840 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 RHAGQ02094 409 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CREMQ03060 361 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 SOX4Q06945 474 aaPredicted RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CSTF3Q12996 717 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CAMK2GQ13555 558 aaPredicted RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GTF2H2Q13888 395 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GTF2H3Q13889 308 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 VEZF1Q14119 521 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 DSC3Q14574 896 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 IHHQ14623 411 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 HKDC1Q2TB90 917 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CDONQ4KMG0 1287 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 IQCCQ4KMZ1 466 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 FAM26DQ5JW98 314 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 SPANXN4Q5MJ08 99 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 C10orf62Q5T681 223 aaPredicted RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 FAM171A1Q5VUB5 890 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 RNLSQ5VYX0 342 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 NXNL2Q5VZ03 156 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 WSCD1Q658N2 575 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ALG1LQ6GMV1 187 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GTF2H2CQ6P1K8 395 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 FAM171BQ6P995 826 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 AFTPHQ6ULP2 937 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CCDC149Q6ZUS6 474 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GOLGA7Q7Z5G4 137 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 MILR1Q7Z6M3 343 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 DDX53Q86TM3 631 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GRAMD2AQ8IUY3 354 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 RAVER1Q8IY67 606 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 TCAIMQ8N3R3 496 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 STX19Q8N4C7 294 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GDPD1Q8N9F7 314 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ARRDC4Q8NCT1 418 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 DUSP18Q8NEJ0 188 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 KLHDC9Q8NEP7 349 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 OR4F6Q8NGB9 312 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 ASB15Q8WXK1 588 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 REPS1Q96D71 796 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC39A13Q96H72 371 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 POM121Q96HA1 1249 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 PCED1BQ96HM7 432 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 FCRL2Q96LA5 508 aaPredicted RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 SENP8Q96LD8 212 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 FRMD6Q96NE9 622 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 NEDD4LQ96PU5 975 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 OR52E6Q96RD3 313 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 GPR21Q99679 349 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 BARD1Q99728 777 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 RHNO1Q9BSD3 238 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 TBCDQ9BTW9 1192 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 CENPOQ9BU64 300 aa4.04□□□□□ -1.76
PTP4A1-205ENST00000626021 NTMT1Q9BV86 223 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms