RNA–Protein interactions for RNA: ENST00000625943.1

SNORD38B-202, Transcript of small nucleolar RNA, C/D box 38B, humanhuman

BASIC

Gene SNORD38B, Length 69 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD38B-202ENST00000625943 ATF6BQ99941 703 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 TREX2Q9BQ50 279 aaPredicted RBP0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 CHCHD6Q9BRQ6 235 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 TEX12Q9BXU0 123 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 GOLPH3LQ9H4A5 285 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 SYNCQ9H7C4 482 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 DNAJC4Q9NNZ3 241 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 GIMAP4Q9NUV9 329 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 DPP3Q9NY33 737 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 NYAP2Q9P242 653 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 LNPEPQ9UIQ6 1025 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 POMT2Q9UKY4 750 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 VSIG4Q9Y279 399 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 ZNF256Q9Y2P7 627 aaPredicted RBP0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 MRPS18CQ9Y3D5 142 aaKnown RBP0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 NEDD4P46934 1319 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 ITIH6Q6UXX5 1313 aa0.78□□□□□ -2.28
SNORD38B-202ENST00000625943 RAI1Q7Z5J4 1906 aaPredicted RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 IGHV3-16A0A0C4DH30 117 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 FAM168BA1KXE4 195 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 RPL37AP8A6NKH3 93 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 TRIM77I1YAP6 450 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 K7ENM7 598 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CCL24O00175 119 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 AP3D1O14617 1153 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CDX4O14627 284 aaPredicted RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 SURF4O15260 269 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 TXNL1O43396 289 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 SAP30O75446 220 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 BAIAP3O94812 1187 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 VENTXO95231 258 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 PGM3O95394 542 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 BAG3O95817 575 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 HPP00738 406 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 THY1P04216 161 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 GIG44P09565 113 aaPredicted RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CSH1P0DML2 217 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CSH2P0DML3 217 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 SAGP10523 405 aaPredicted RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 EPCAMP16422 314 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 ZNF19P17023 458 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 AOC1P19801 751 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 KLK2P20151 261 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CD22P20273 847 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 OXTRP30559 389 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 GCH1P30793 250 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 DUTP33316 252 aaKnown RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 GSK3BP49841 420 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 KHKP50053 298 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 STAT2P52630 851 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 NDST2P52849 883 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 LBX1P52954 281 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 DCDC1P59894 354 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 ABCE1P61221 599 aaKnown RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 LYZP61626 148 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 RASGEF1BQ0VAM2 473 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 EPS8Q12929 822 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 TRAP1Q12931 704 aaKnown RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 HSPB3Q12988 150 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 NPTX1Q15818 432 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 SNAPC1Q16533 368 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 DUSP5Q16690 384 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 Q1RN00 199 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 UTF1Q5T230 341 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 LINC00242Q5T6M2 205 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 AGAP7PQ5VUJ5 663 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 KHDRBS2Q5VWX1 349 aaKnown RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 FAM205BPQ63HN1 556 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CCDC70Q6NSX1 233 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 FAM180BQ6P0A1 224 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 RPAINQ86UA6 219 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CARM1Q86X55 608 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 LINC00346Q8IVM7 164 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 OR4N5Q8IXE1 308 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 RPAP2Q8IXW5 612 aaPredicted RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 EXOC8Q8IYI6 725 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 ZBED8Q8IZ13 594 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 RCOR2Q8IZ40 523 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 SLC22A15Q8IZD6 547 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 ROBO4Q8WZ75 1007 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 NXNL1Q96CM4 212 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 LRRC3BQ96PB8 259 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 KLHL5Q96PQ7 755 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 PSMB7Q99436 277 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 PSMD1Q99460 953 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 NDNQ99608 321 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 SEPHS2Q99611 448 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 LCE3DQ9BYE3 92 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 SLC2A11Q9BYW1 496 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 NYXQ9GZU5 481 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 ACTL8Q9H568 366 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 JPT2Q9H910 190 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CDH20Q9HBT6 801 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 RAVER2Q9HCJ3 691 aaKnown RBP0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 PDE7BQ9NP56 450 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 IL1RAPQ9NPH3 570 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 GSN-AS1Q9NRJ2 163 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 CLEC5AQ9NY25 188 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 HAO2Q9NYQ3 351 aa0.77□□□□□ -2.29
SNORD38B-202ENST00000625943 IL17BQ9UHF5 180 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms