RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 IYDQ6PHW0 289 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 FAM86B1Q8N7N1 296 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PDPRQ8NCN5 879 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 OR52E1Q8NGJ3 308 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 RAD51AP1Q96B01 352 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 RETREG1Q9H6L5 497 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PCDHGB4Q9UN71 923 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 SNX6Q9UNH7 406 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PCDHGB5Q9Y5G0 923 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 FRYQ5TBA9 3013 aa10.15□□□□□ -0.78
VPS11-208ENST00000621676 PRSS38A1L453 326 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 AGAP14A8MT82 685 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 YY2O15391 372 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 GMFGO60234 142 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 PAPLNO95428 1278 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 SDC1P18827 310 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 HTR1BP28222 390 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 SLC26A3P40879 764 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 DBPQ10586 325 aaPredicted RBP10.15□□□□□ -0.79
VPS11-208ENST00000621676 NOXRED1Q6NXP6 359 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 C16orf89Q6UX73 402 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 PCYOX1LQ8NBM8 494 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 OR8K5Q8NH50 307 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 RNF217Q8TC41 542 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 RAB8BQ92930 207 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 DNAJA3Q96EY1 480 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 VPS50Q96JG6 964 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 KCTD14Q9BQ13 255 aaPredicted RBP10.15□□□□□ -0.79
VPS11-208ENST00000621676 GEMIN8Q9NWZ8 242 aaKnown RBP10.15□□□□□ -0.79
VPS11-208ENST00000621676 VPS29Q9UBQ0 182 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 SPTA1P02549 2419 aa10.15□□□□□ -0.79
VPS11-208ENST00000621676 CHUKO15111 745 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 KPNA5O15131 536 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 NDUFS4O43181 175 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 FKBP9O95302 570 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 IDO1P14902 403 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 PFKLP17858 780 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 ATP6V1B2P21281 511 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 FEN1P39748 380 aaKnown RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 CRATP43155 626 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 ERV3-1Q14264 604 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 PLEKHS1Q5SXH7 462 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 ZCCHC8Q6NZY4 707 aaKnown RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 ZNF852Q6ZMS4 543 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 FKBP9P1Q75LS8 142 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 ZNF551Q7Z340 670 aaPredicted RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 N4BP2L2Q92802 583 aaPredicted RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 ITCHQ96J02 903 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 FAR2Q96K12 515 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 PKP2Q99959 881 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 TUBB6Q9BUF5 446 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 POPDC3Q9HBV1 291 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 SPAG4Q9NPE6 437 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 NOP53Q9NZM5 478 aaKnown RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 HEATR5BQ9P2D3 2071 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 GFYI3L273 518 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 RFXANKO14593 260 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 TPST2O60704 377 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 EEDO75530 441 aaKnown RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 STAMBPO95630 424 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 ADH1BP00325 375 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 ALOX15P16050 662 aaPredicted RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 TMEM214Q6NUQ4 689 aaKnown RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 IRGCQ6NXR0 463 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 TNFAIP8L2Q6P589 184 aaPredicted RBP10.14□□□□□ -0.79
VPS11-208ENST00000621676 TMIGD1Q6UXZ0 262 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 LRRC74BQ6ZQY2 392 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 LMX1AQ8TE12 382 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 EME1Q96AY2 570 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 CNBD2Q96M20 576 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 EHD1Q9H4M9 534 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 SYNPO2LQ9H987 977 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 MIEF1Q9NQG6 463 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 EXD2Q9NVH0 621 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 PPT2Q9UMR5 302 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 CLCA2Q9UQC9 943 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 ERVK-11Q9UQG0 969 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 DENND4CQ5VZ89 1909 aa10.14□□□□□ -0.79
VPS11-208ENST00000621676 IGLV3-16A0A075B6K0 115 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 RNF103-CHMP3A0A140T963 221 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 MYO1GB0I1T2 1018 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 GSTM1P09488 218 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 IL1RNP18510 177 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 SLC6A2P23975 617 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 AQP4P55087 323 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 AP2B1P63010 937 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 GSTM4Q03013 218 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 MTAPQ13126 283 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 SPIDRQ14159 915 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 METTL21CQ5VZV1 264 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 FAM92BQ6ZTR7 304 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 SMYD1Q8NB12 490 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 OR2L2Q8NH16 312 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 ACTRT2Q8TDY3 377 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 SERPINI1Q99574 410 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 AIG1Q9NVV5 245 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 AASSQ9UDR5 926 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 MUC6Q6W4X9 2439 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 PIPSLA2A3N6 862 aa10.13□□□□□ -0.79
VPS11-208ENST00000621676 ERI3O43414 337 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms