RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FBXL12Q9NXK8 326 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 SPASTQ9UBP0 616 aa18.95■□□□□ 0.62
PDLIM3-212ENST00000620787 PLXNB3Q9ULL4 1909 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 ALPK3Q96L96 1907 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 MED26O95402 600 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 PTHP01270 115 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 STSP08842 583 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 ACPPP15309 386 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 ATF6P18850 670 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 PRPS1L1P21108 318 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 RPIAP49247 311 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 NUDT6P53370 316 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 UGT2B15P54855 530 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 GPR17Q13304 367 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 VEZF1Q14119 521 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 SLX4IPQ5VYV7 408 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 LRRC70Q7Z2Q7 622 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 TSEN54Q7Z6J9 526 aaKnown RBP18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 CLECL1Q8IZS7 167 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 Q96MT0 163 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 EMILIN2Q9BXX0 1053 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 RAD18Q9NS91 495 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 GPR83Q9NYM4 423 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 CRLS1Q9UJA2 301 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 PEX16Q9Y5Y5 336 aa18.94■□□□□ 0.62
PDLIM3-212ENST00000620787 TMEM229AB2RXF0 380 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 DNTTP04053 509 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 MZF1P28698 734 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 ETV6P41212 452 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 KRR1Q13601 381 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 CHRNA6Q15825 494 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 FBXO43Q4G163 708 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 RNF175Q8N4F7 328 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 TP53INP1Q96A56 240 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 FCRL1Q96LA6 429 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 CDK5RAP1Q96SZ6 601 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 HTATIP2Q9BUP3 242 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 RAPGEFL1Q9UHV5 662 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 PCDHGB3Q9Y5G1 929 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 YY2O15391 372 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 SSX4O60224 188 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 PRAMEF4O60810 478 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 STC2O76061 302 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 CPSF4O95639 269 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 NUDT7P0C024 238 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 BPIP17213 487 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 CRISP3P54108 245 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 COPZ1P61923 177 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 SRSF11Q05519 484 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 ARMCX4Q5H9R4 360 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 AGAP6Q5VW22 663 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 PRAMEF9Q5VWM5 478 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 L3MBTL4Q8NA19 623 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 AGAP4Q96P64 663 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 FEVQ99581 238 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 SDHCQ99643 169 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 CHCHD6Q9BRQ6 235 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 TTLL2Q9BWV7 592 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 CHST8Q9H2A9 424 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 GKN1Q9NS71 199 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 ZNF226Q9NYT6 803 aa18.93■□□□□ 0.62
PDLIM3-212ENST00000620787 UPK3BL1B0FP48 263 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 UPK3BL2E5RIL1 263 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 CCNKO75909 580 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 SNX4O95219 450 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 CLDN7O95471 211 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 PCSK2P16519 638 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 RGS6P49758 472 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 CDKL4Q5MAI5 379 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 RSBN1Q5VWQ0 802 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 LYPLAL1Q5VWZ2 237 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 TTC23LQ6PF05 361 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 SYT12Q8IV01 421 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 CSGALNACT1Q8TDX6 532 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 LINC01599Q8WXQ3 324 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 WBP2Q969T9 261 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 COL21A1Q96P44 957 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 KCTD5Q9NXV2 234 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 EHD3Q9NZN3 535 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 AFF4Q9UHB7 1163 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 PCDHGA2Q9Y5H1 932 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 LYVE1Q9Y5Y7 322 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 GLYATL1P3A0A0U1RQE8 302 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 COCHO43405 550 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 EOMESO95936 686 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 GABRB1P18505 474 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 IRF3Q14653 427 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 CDKN3Q16667 212 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 OR6K2Q8NGY2 324 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 FAM193BQ96PV7 902 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 RUBCNLQ9H714 662 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 FAM120CQ9NX05 1096 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 MKLN1Q9UL63 735 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 PADI2Q9Y2J8 665 aa18.92■□□□□ 0.62
PDLIM3-212ENST00000620787 GFRA2O00451 464 aa18.91■□□□□ 0.62
PDLIM3-212ENST00000620787 AOC2O75106 756 aa18.91■□□□□ 0.62
PDLIM3-212ENST00000620787 DEFA1P59665 94 aa18.91■□□□□ 0.62
PDLIM3-212ENST00000620787 DEFA3P59666 94 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms