RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 RHDQ02161 417 aa20.81■□□□□ 0.92
SGMS1-210ENST00000619438 CHST15Q7LFX5 561 aaPredicted RBP20.81■□□□□ 0.92
SGMS1-210ENST00000619438 APLFQ8IW19 511 aaPredicted RBP20.81■□□□□ 0.92
SGMS1-210ENST00000619438 CDYL2Q8N8U2 506 aa20.81■□□□□ 0.92
SGMS1-210ENST00000619438 OR2T11Q8NH01 316 aa20.81■□□□□ 0.92
SGMS1-210ENST00000619438 OR2AG1Q9H205 316 aa20.81■□□□□ 0.92
SGMS1-210ENST00000619438 SMOXQ9NWM0 555 aa20.81■□□□□ 0.92
SGMS1-210ENST00000619438 PRKAB1Q9Y478 270 aa20.81■□□□□ 0.92
SGMS1-210ENST00000619438 IGF2RP11717 2491 aa20.81■□□□□ 0.92
SGMS1-210ENST00000619438 USP24Q9UPU5 2620 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 DYTNA2CJ06 578 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 MAGEA13PA6NCF6 341 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 C1QTNF9BB2RNN3 333 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ZZEF1O43149 2961 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 C1QTNF9P0C862 333 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ACTR1BP42025 376 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 DIO3P55073 304 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ACTR1AP61163 376 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 INSM1Q01101 510 aaPredicted RBP20.8■□□□□ 0.92
SGMS1-210ENST00000619438 TRAF3Q13114 568 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 BIRC2Q13490 618 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 GBX1Q14549 363 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 SMU1Q2TAY7 513 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ATP13A5Q4VNC0 1218 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 SFT2D3Q587I9 215 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 C6orf136Q5SQH8 315 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 Q6ZSR9 355 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ADCY4Q8NFM4 1077 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 OR6C4Q8NGE1 309 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 LRGUKQ96M69 825 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 CD244Q9BZW8 370 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 RMI1Q9H9A7 625 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 TAAR2Q9P1P5 351 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ATXN10Q9UBB4 475 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 CLCA2Q9UQC9 943 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 PLEKHM1Q9Y4G2 1056 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 DMXL2Q8TDJ6 3036 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 TCRBV3S1A0A5B6 114 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 HSD17B1P14061 328 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ITGB6P18564 788 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ZFP36L2P47974 494 aaKnown RBP20.8■□□□□ 0.92
SGMS1-210ENST00000619438 TARDBPQ13148 414 aaKnown RBP eCLIP20.8■□□□□ 0.921e-6■■■■□ 26.2
SGMS1-210ENST00000619438 VPS26BQ4G0F5 336 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ATP6AP1LQ52LC2 224 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ZNF648Q5T619 568 aaPredicted RBP20.8■□□□□ 0.92
SGMS1-210ENST00000619438 OGFOD3Q6PK18 319 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 UNQ6494/PRO21346Q6UXR6 183 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 SPATA24Q86W54 205 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 NRROSQ86YC3 692 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 TICAM1Q8IUC6 712 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 OR4F6Q8NGB9 312 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 METTL6Q8TCB7 284 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 ZDHHC1Q8WTX9 485 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 RHBDF1Q96CC6 855 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 SPDL1Q96EA4 605 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 IPPKQ9H8X2 491 aa20.8■□□□□ 0.92
SGMS1-210ENST00000619438 FXYD1O00168 92 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 EEDO75530 441 aaKnown RBP20.79■□□□□ 0.92
SGMS1-210ENST00000619438 SLC22A3O75751 556 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 NPPAP01160 153 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 CAPN1P07384 714 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 OR56A5P0C7T3 313 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 SLC7A2P52569 658 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 CDKL1Q00532 357 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 B4GALNT1Q00973 533 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 EMX2Q04743 252 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 C6orf10Q5SRN2 563 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 GOLM1Q8NBJ4 401 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 FAM156AQ8NDB6 213 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 GPR156Q8NFN8 814 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 ZUFSPQ96AP4 578 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 MYCBPQ99417 103 aaPredicted RBP20.79■□□□□ 0.92
SGMS1-210ENST00000619438 CCDC3Q9BQI4 270 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 VCXQ9H320 206 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 CXorf56Q9H5V9 222 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 SYNDIG1Q9H7V2 258 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 LRP4O75096 1905 aa20.79■□□□□ 0.92
SGMS1-210ENST00000619438 FAM234BA2RU67 622 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 NUAK1O60285 661 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 MTX2O75431 263 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 WDR47O94967 919 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 MT-CO3P00414 261 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 ENO2P09104 434 aaPredicted RBP20.78■□□□□ 0.92
SGMS1-210ENST00000619438 UQCRBP14927 111 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 ZNF8P17098 575 aaPredicted RBP20.78■□□□□ 0.92
SGMS1-210ENST00000619438 TCN1P20061 433 aaPredicted RBP20.78■□□□□ 0.92
SGMS1-210ENST00000619438 PIK3CGP48736 1102 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 KCNK10P57789 538 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 PHKG1Q16816 387 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 C14orf28Q4W4Y0 310 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 PERM1Q5SV97 790 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 LRRC58Q96CX6 371 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 VPS35Q96QK1 796 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 TMEM79Q9BSE2 394 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 NTMT1Q9BV86 223 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 TMEM121BQ9BXQ6 578 aaPredicted RBP20.78■□□□□ 0.92
SGMS1-210ENST00000619438 TRIM54Q9BYV2 358 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 DTNAQ9Y4J8 743 aa20.78■□□□□ 0.92
SGMS1-210ENST00000619438 KMT2BQ9UMN6 2715 aaPredicted RBP20.78■□□□□ 0.92
SGMS1-210ENST00000619438 K7EPI3 171 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms