RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 BRINP2Q9C0B6 783 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 NUAK2Q9H093 628 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 DSN1Q9H410 356 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 IPPKQ9H8X2 491 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TMEM45AQ9NWC5 275 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 PAK1IP1Q9NWT1 392 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 IMPAD1Q9NX62 359 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 NUDT4Q9NZJ9 180 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TBC1D14Q9P2M4 693 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 OPTCQ9UBM4 332 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 CLEC4EQ9ULY5 219 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 CAB39Q9Y376 341 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 K7ERQ8 282 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 RGS5O15539 181 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CREG1O75629 220 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GABARAPO95166 117 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 KRT6AP02538 564 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 KRT6BP04259 564 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 JMJD7P0C870 316 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PRDX3P30048 256 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CD70P32970 193 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 VIPR2P41587 438 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GNPDA1P46926 289 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ID4P47928 161 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 KRT6CP48668 564 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 TUBA1BP68363 451 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CDK5R2Q13319 367 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 AQP6Q13520 282 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CLCA4Q14CN2 919 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 FXNQ16595 210 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ANGPTL8Q6UXH0 198 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 TUBA1AQ71U36 451 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 DPP10Q8N608 796 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 OR6Q1Q8NGQ2 317 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PROKR1Q8TCW9 393 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 SGCDQ92629 289 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 IRF7Q92985 503 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 MYDGFQ969H8 173 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 VMP1Q96GC9 406 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 REXO5Q96IC2 774 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CLPBQ9H078 707 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 EXOSC4Q9NPD3 245 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PDP1Q9P0J1 537 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 METRNQ9UJH8 293 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF221Q9UK13 617 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PCTPQ9UKL6 214 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 INTS6Q9UL03 887 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 BTBD3Q9Y2F9 522 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC9A3R1O14745 358 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 MOSPD3O75425 235 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PGLSO95336 258 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 MT-ND2P03891 347 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 BMP4P12644 408 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PFKLP17858 780 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 DCTP40126 519 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 RGRP47804 291 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PIK3CGP48736 1102 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ARF5P84085 180 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 RAPSNQ13702 412 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GTF2H2Q13888 395 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 SYT16Q17RD7 645 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ARMC4Q5T2S8 1044 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ATAD3BQ5T9A4 648 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GTF2H2CQ6P1K8 395 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CYHR1Q6ZMK1 362 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 BTLAQ7Z6A9 289 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 STK40Q8N2I9 435 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CPXM2Q8N436 756 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CLHC1Q8NHS4 586 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 FRS2Q8WU20 508 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 IPCEF1Q8WWN9 437 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 FCGR1BQ92637 280 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 FUBP1Q96AE4 644 aaKnown RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ADGRE3Q9BY15 652 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GPR63Q9BZJ6 419 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CIPCQ9C0C6 399 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 C1orf109Q9NX04 203 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF639Q9UID6 485 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 STOML2Q9UJZ1 356 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 RPS6KA6Q9UK32 745 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 RAI2Q9Y5P3 530 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ANKRD12Q6UB98 2062 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PRMT5O14744 637 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GREM1O60565 184 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 NIPSNAP2O75323 286 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 MTHFD2P13995 350 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 TYRP14679 529 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 LPOP22079 712 aaPredicted RBP6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CD40LGP29965 261 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 MC4RP32245 332 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PIGAP37287 484 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 EPHA5P54756 1037 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 CD300CQ08708 224 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ELP6Q0PNE2 266 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 SELPLGQ14242 412 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 PHKG1Q16816 387 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF691Q5VV52 312 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 GTF2IRD2BQ6EKJ0 949 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 DESI1Q6ICB0 168 aa6.78□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF783Q6ZMS7 281 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms