RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 MEI4A8MW99 385 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 HNRNPDLO14979 420 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 PRKRAO75569 313 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 BCAR3O75815 825 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SYF2O95926 243 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 PIGRP01833 764 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 ACRP10323 421 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 ITGB5P18084 799 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 EPORP19235 508 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 TNFRSF1AP19438 455 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 AGXTP21549 392 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 DTYMKP23919 212 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 CD27P26842 260 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 CDKN1AP38936 164 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC19A1P41440 591 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 NCKAP1LP55160 1127 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 NRG3P56975 720 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 GUCY1A3Q02108 690 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 ATP1A4Q13733 1029 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 UBAP2LQ14157 1087 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 KPNB1Q14974 876 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 ZYXQ15942 572 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SPRED3Q2MJR0 410 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 PDZK1Q5T2W1 519 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 PAPD7Q5XG87 772 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 CARD17Q5XLA6 110 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 E4F1Q66K89 784 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 TCEAL6Q6IPX3 200 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 CCDC137Q6PK04 289 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 RNF207Q6ZRF8 634 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 KCTD9Q7L273 389 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 TRAPPC11Q7Z392 1133 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 REC114Q7Z4M0 266 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SPATA19Q7Z5L4 167 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 PHF13Q86YI8 300 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 CCDC117Q8IWD4 279 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 PPIL6Q8IXY8 311 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 KBTBD2Q8IY47 623 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 GCNT2Q8N0V5 402 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SVOPQ8N4V2 548 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 L3MBTL4Q8NA19 623 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 OR2D3Q8NGH3 330 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 GRPEL2Q8TAA5 225 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 ELMO1Q92556 727 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SLC5A5Q92911 643 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 ZNF486Q96H40 463 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 C10orf90Q96M02 699 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 RILPQ96NA2 401 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SLITRK1Q96PX8 696 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 TMED9Q9BVK6 235 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SGPP1Q9BX95 441 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SMURF1Q9HCE7 757 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 CSNK1G1Q9HCP0 422 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 CD209Q9NNX6 404 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 IFT46Q9NQC8 304 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 TLR9Q9NR96 1032 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 ABCC13Q9NSE7 274 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 GIMAP4Q9NUV9 329 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 DKK4Q9UBT3 224 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SMPXQ9UHP9 88 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 MKLN1Q9UL63 735 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 PCDHA4Q9UN74 947 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 SALL1Q9NSC2 1324 aa3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 MYH14Q7Z406 1995 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-233ENST00000618836 A0A1W2PPV4 95 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 NPIPB15A6NHN6 443 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 METTL15A6NJ78 407 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 A8MXQ7 604 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 KCNU1A8MYU2 1149 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 TGFBR3LH3BV60 316 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 AGPSO00116 658 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 CCRL2O00421 344 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 GPAA1O43292 621 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 TRIM13O60858 407 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 PPBPP02775 128 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 FUCA1P04066 466 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 LCKP06239 509 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 SRPRAP08240 638 aaKnown RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 LBPP18428 481 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 ZNF10P21506 573 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 PRKCHP24723 683 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 CSNK1EP49674 416 aaKnown RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 ELLP55199 621 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 SUMO3P55854 103 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 PSME3P61289 254 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 VSNL1P62760 191 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 MEF2AQ02078 507 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 EGR3Q06889 387 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 TFDP1Q14186 410 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 TOMM34Q15785 309 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 WDR72Q3MJ13 1102 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 TIGD5Q53EQ6 642 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 RABGAP1LQ5R372 815 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 MANEALQ5VSG8 457 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 IRAK1BP1Q5VVH5 260 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 STYK1Q6J9G0 422 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 ANKRD26P1Q6NSI1 321 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 CRTC3Q6UUV7 619 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 GK5Q6ZS86 529 aa3.94□□□□□ -1.78
UBE2D3-233ENST00000618836 HFE2Q6ZVN8 426 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms