RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ANAPC2Q9UJX6 822 aa15.26■□□□□ 0.03
BRCA1-228ENST00000618469 PTRH2Q9Y3E5 179 aaKnown RBP15.26■□□□□ 0.03
BRCA1-228ENST00000618469 SPTBN1Q01082 2364 aaKnown RBP15.26■□□□□ 0.03
BRCA1-228ENST00000618469 ARGFXA6NJG6 315 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 KLF7O75840 302 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-228ENST00000618469 FAM155BO75949 473 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 DNAJB5O75953 348 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 MED26O95402 600 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 CDH1P12830 882 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 STMN1P16949 149 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 OTX2P32243 289 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 OR1D4P47884 311 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 CHAF1BQ13112 559 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 NAB1Q13506 487 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 TSNQ15631 228 aaKnown RBP15.25■□□□□ 0.03
BRCA1-228ENST00000618469 MUM1Q2TAK8 710 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 HKDC1Q2TB90 917 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 PRTGQ2VWP7 1150 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 FAM214AQ32MH5 1076 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 MRPL14Q6P1L8 145 aaKnown RBP15.25■□□□□ 0.03
BRCA1-228ENST00000618469 LCTLQ6UWM7 567 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 COX15Q7KZN9 410 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 ADAMTSL2Q86TH1 951 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 ATL1Q8WXF7 558 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 FKBP10Q96AY3 582 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 FBXL8Q96CD0 374 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 ABHD17AQ96GS6 310 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 OR2A5Q96R48 311 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 EGFL8Q99944 293 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 FAM129AQ9BZQ8 928 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 SLC22A11Q9NSA0 550 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 CTNNAL1Q9UBT7 734 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 TUBD1Q9UJT1 453 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 NOVA2Q9UNW9 492 aaKnown RBP15.25■□□□□ 0.03
BRCA1-228ENST00000618469 RUVBL1Q9Y265 456 aaKnown RBP15.25■□□□□ 0.03
BRCA1-228ENST00000618469 MAU2Q9Y6X3 613 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 MYO9AB2RTY4 2548 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 PCSK5Q92824 1860 aa15.25■□□□□ 0.03
BRCA1-228ENST00000618469 K7EM74 188 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 P2RX6O15547 441 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 WISP3O95389 354 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-228ENST00000618469 STATHP02808 62 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 HRH2P25021 359 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 SPRP35270 261 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-228ENST00000618469 UQCRFS1P47985 274 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 ATP1A4Q13733 1029 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 ZXDCQ2QGD7 858 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-228ENST00000618469 GRTP1Q5TC63 336 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 MRGPREQ86SM8 312 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 CEP112Q8N8E3 955 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 OR2Y1Q8NGV0 311 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 OR56A3Q8NH54 315 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 IFT81Q8WYA0 676 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 ANKRD7Q92527 254 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 FMO2Q99518 471 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 HAUS8Q9BT25 410 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 TRIM55Q9BYV6 548 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 TMEM184CQ9NVA4 438 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 NINJ2Q9NZG7 142 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 CTSFQ9UBX1 484 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 PLEKHB1Q9UF11 243 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-228ENST00000618469 OARD1Q9Y530 152 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 SEC16AO15027 2179 aa15.24■□□□□ 0.03
BRCA1-228ENST00000618469 NUP210LQ5VU65 1888 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 CCDC88CQ9P219 2028 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 MKRN2OSH3BPM6 223 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 ANXA5P08758 320 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 CD63P08962 238 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 PIM1P11309 404 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-228ENST00000618469 PHBP35232 272 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 RAB10P61026 200 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 RPS15AP62244 130 aaKnown RBP15.23■□□□□ 0.03
BRCA1-228ENST00000618469 CSNK1G2P78368 415 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 ZKSCAN8Q15776 578 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-228ENST00000618469 GLE1Q53GS7 698 aaKnown RBP15.23■□□□□ 0.03
BRCA1-228ENST00000618469 UBAP2Q5T6F2 1119 aaKnown RBP15.23■□□□□ 0.03
BRCA1-228ENST00000618469 CEP128Q6ZU80 1094 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 CMC1Q7Z7K0 106 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 TMEM151BQ8IW70 566 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 SPATA6LQ8N4H0 392 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 MIB2Q96AX9 1013 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 MRRFQ96E11 262 aaKnown RBP15.23■□□□□ 0.03
BRCA1-228ENST00000618469 TSNARE1Q96NA8 513 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 OR4K3Q96R72 315 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 DERL2Q9GZP9 239 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 ACSS2Q9NR19 701 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 TLK1Q9UKI8 766 aa15.23■□□□□ 0.03
BRCA1-228ENST00000618469 CREBBPQ92793 2442 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 SPENQ96T58 3664 aaKnown RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 FEZF1A0PJY2 475 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 NCF1BA6NI72 391 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 NCF1CA8MVU1 366 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 UMODP07911 640 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 CCDC166P0CW27 439 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 NCF1P14598 390 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 NPPBP16860 134 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 FBLP22087 321 aaKnown RBP15.22■□□□□ 0.03
BRCA1-228ENST00000618469 ECHS1P30084 290 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 GRK3P35626 688 aa15.22■□□□□ 0.03
BRCA1-228ENST00000618469 CDKL1Q00532 357 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms