RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 BCL6P41182 706 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 CASP2P42575 452 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 GABRA4P48169 554 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 NAA20P61599 178 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 RELAQ04206 551 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 TRAF3Q13114 568 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 EIF3IQ13347 325 aaKnown RBP14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 LAPTM5Q13571 262 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 PCM1Q15154 2024 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 RBBP5Q15291 538 aaKnown RBP14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 CHI3L2Q15782 390 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 FRMD7Q6ZUT3 714 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 RNF44Q7L0R7 432 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 OR4N4Q8N0Y3 316 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 KRT78Q8N1N4 520 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 TBC1D19Q8N5T2 526 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 N4BP2L2Q92802 583 aaPredicted RBP14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 CNDP1Q96KN2 507 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 OR6C1Q96RD1 312 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 EFCAB11Q9BUY7 163 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 NTMT1Q9BV86 223 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 FGF21Q9NSA1 209 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 SIDT1Q9NXL6 827 aaKnown RBP14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 PISDQ9UG56 409 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 SATB2Q9UPW6 733 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 DMXL1Q9Y485 3027 aa14.96□□□□□ -0.01
PCDHGC3-204ENST00000617222 TRBC2A0A5B9 178 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 B4E171 279 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 TMEM150CB9EJG8 249 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 H0YGG7 62 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 PLD2O14939 933 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 NPHS1O60500 1241 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 SERPINE1P05121 402 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 CTSBP07858 339 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 JMJD7P0C870 316 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 ITIH1P19827 911 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 ETV5P41161 510 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 TSPAN7P41732 249 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 SCTRP47872 440 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 MAPK10P53779 464 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 VSX2P58304 361 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 ERVPABLB-1P60509 514 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 ARF3P61204 181 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 RPS15AP62244 130 aaKnown RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 MC2RQ01718 297 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 LCP2Q13094 533 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 TUBB3Q13509 450 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 E2F2Q14209 437 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 HIST2H2ACQ16777 129 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 C3orf38Q5JPI3 329 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 PAGE2BQ5JRK9 111 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 LIPJQ5W064 366 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 HIST2H2AA3Q6FI13 130 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 FRMPD2BQ6IN97 320 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 TMIGD1Q6UXZ0 262 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 SYVN1Q86TM6 617 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 BMPERQ8N8U9 685 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 L3MBTL4Q8NA19 623 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 MFSD9Q8NBP5 474 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 OR4F6Q8NGB9 312 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 OR6Y1Q8NGX8 325 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 PRR11Q96HE9 360 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 OR2A5Q96R48 311 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 ZNF382Q96SR6 550 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 CTRCQ99895 268 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 SHCBP1LQ9BZQ2 653 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 SPRTNQ9H040 489 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 DRC3Q9H069 523 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 SYNPO2LQ9H987 977 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 FANCEQ9HB96 536 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 APMAPQ9HDC9 416 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 SLC39A1Q9NY26 324 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 ZNF225Q9UK10 706 aa14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 ZNF490Q9ULM2 529 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 COL27A1Q8IZC6 1860 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-204ENST00000617222 CFAP54Q96N23 3096 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 UBFD1O14562 309 aaKnown RBP14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 POLR1CO15160 346 aaPredicted RBP14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 SRPX2O60687 465 aaPredicted RBP14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 UGDHO60701 494 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 OR4F21O95013 312 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 STATHP02808 62 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 EIF2S1P05198 315 aaKnown RBP14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 SPINK2P20155 84 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 HNF4AP41235 474 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 ATP1A2P50993 1020 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 CPSF6Q16630 551 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 CES4AQ5XG92 561 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 GRHL2Q6ISB3 625 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 LETMD1Q6P1Q0 360 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 MED27Q6P2C8 311 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 GPRIN3Q6ZVF9 776 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 LSMEM2Q8N112 164 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 OR1L3Q8NH93 324 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 ZNF501Q96CX3 271 aaPredicted RBP14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 THAP11Q96EK4 314 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 TRMOQ9BU70 441 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 SARGQ9BW04 601 aa14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 PITHD1Q9GZP4 211 aaPredicted RBP14.94□□□□□ -0.02
PCDHGC3-204ENST00000617222 NT5DC2Q9H857 520 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms