RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 GNSP15586 552 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 AMD1P17707 334 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 AVPR2P30518 371 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 PIK3CBP42338 1070 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 RXRGP48443 463 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 NME5P56597 212 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 CORO7P57737 925 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 STX1BP61266 288 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 RPS13P62277 151 aaKnown RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 TBL3Q12788 808 aaKnown RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 KIR2DS3Q14952 304 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 SF1Q15637 639 aaKnown RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 HIST2H2ACQ16777 129 aaPredicted RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 HIST2H2AA3Q6FI13 130 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 ZNF425Q6IV72 752 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 RBM12BQ8IXT5 1001 aaKnown RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 KRT78Q8N1N4 520 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 SLC25A45Q8N413 288 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 ARL14Q8N4G2 192 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 KIF2BQ8N4N8 673 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 RBM15BQ8NDT2 890 aaKnown RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 PROKR1Q8TCW9 393 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 UBE2E3Q969T4 207 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 KLHL29Q96CT2 875 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 PITHD1Q9GZP4 211 aaPredicted RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 MRPS30Q9NP92 439 aaKnown RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 DLGAP4Q9Y2H0 992 aa13.7□□□□□ -0.22
USP39-220ENST00000613444 RRP15Q9Y3B9 282 aaKnown RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 POLR3HQ9Y535 204 aaPredicted RBP13.7□□□□□ -0.22
USP39-220ENST00000613444 FEZF1A0PJY2 475 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 OR6C74A6NCV1 312 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 ISM1B1AKI9 464 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 B2RBV5 119 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 LCMT2O60294 686 aaKnown RBP13.69□□□□□ -0.22
USP39-220ENST00000613444 SP9P0CG40 484 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 IL12AP29459 219 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 CNR2P34972 360 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 RASSF2P50749 326 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 UFM1P61960 85 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 BNIP3Q12983 259 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 CYLC2Q14093 348 aaPredicted RBP13.69□□□□□ -0.22
USP39-220ENST00000613444 DEFB133Q30KQ1 61 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
USP39-220ENST00000613444 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.69□□□□□ -0.22
USP39-220ENST00000613444 ELF4Q99607 663 aaPredicted RBP13.69□□□□□ -0.22
USP39-220ENST00000613444 BTBD10Q9BSF8 475 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 SARGQ9BW04 601 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 SUSD2Q9UGT4 822 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 BCKDHAP12694 445 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 ACPPP15309 386 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 CXCR2P25025 360 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 KCNJ2P63252 427 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 MAD2L1Q13257 205 aaPredicted RBP13.69□□□□□ -0.22
USP39-220ENST00000613444 SYT12Q8IV01 421 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 GPR156Q8NFN8 814 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 UTP4Q969X6 686 aaKnown RBP13.69□□□□□ -0.22
USP39-220ENST00000613444 SLC22A18Q96BI1 424 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 METTL2AQ96IZ6 378 aaKnown RBP13.69□□□□□ -0.22
USP39-220ENST00000613444 DPH7Q9BTV6 452 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 TBC1D10AQ9BXI6 508 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 C1orf21Q9H246 121 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 SYNPO2LQ9H987 977 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 TMEM184CQ9NVA4 438 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 ZIM2Q9NZV7 527 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 DOLKQ9UPQ8 538 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 TMED5Q9Y3A6 229 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 CROCCQ5TZA2 2017 aa13.69□□□□□ -0.22
USP39-220ENST00000613444 C9JVG2 144 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 FBP2O00757 339 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 CCNDBP1O95273 360 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 HOXB3P14651 431 aaPredicted RBP13.68□□□□□ -0.22
USP39-220ENST00000613444 UGT2B7P16662 529 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 POLR2CP19387 275 aaPredicted RBP13.68□□□□□ -0.22
USP39-220ENST00000613444 CMPK1P30085 196 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 GRIA3P42263 894 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 PTGR1Q14914 329 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 RBBP5Q15291 538 aaKnown RBP13.68□□□□□ -0.22
USP39-220ENST00000613444 RPS6KA2Q15349 733 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 BLOC1S3Q6QNY0 202 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 PLD3Q8IV08 490 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 CHTF18Q8WVB6 975 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 PIGKQ92643 395 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 APOLD1Q96LR9 279 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 RTKNQ9BST9 563 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 MRPL1Q9BYD6 325 aaKnown RBP13.68□□□□□ -0.22
USP39-220ENST00000613444 UCK1Q9HA47 277 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 TMEM45AQ9NWC5 275 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 ACTR10Q9NZ32 417 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 EIF3LQ9Y262 564 aaKnown RBP13.68□□□□□ -0.22
USP39-220ENST00000613444 KLHL20Q9Y2M5 609 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 CSNK1G3Q9Y6M4 447 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 ASXL3Q9C0F0 2248 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 WDR87Q6ZQQ6 2873 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 TRBC2A0A5B9 178 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 SH3BGRLO75368 114 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 SLC22A3O75751 556 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 TGFB1P01137 390 aa13.68□□□□□ -0.22
USP39-220ENST00000613444 ANXA6P08133 673 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms