RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ZSCAN5DPP0CG00 497 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TAS2R50P59544 299 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 C1orf94Q6P1W5 598 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 IGFN1Q86VF2 1251 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 MOAP1Q96BY2 351 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TMEM248Q9NWD8 314 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 RTTNQ86VV8 2226 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 OR7A17O14581 309 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ZNF35P13682 527 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 NEUROD4Q9HD90 331 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LUZP4Q9P127 313 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TRAV6A0A075B6T7 132 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 A0A1W2PRQ8 180 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LYRM1O43325 122 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 HSD17B2P37059 387 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 GLUD2P49448 558 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 CCR4P51679 360 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TARDBPQ13148 414 aaKnown RBP eCLIP8.55□□□□□ -1.04
TTC28-208ENST00000612946 KEAP1Q14145 624 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TBC1D25Q3MII6 688 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 C1orf186Q6ZWK4 172 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 PXKQ7Z7A4 578 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 HS3ST5Q8IZT8 346 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 MS4A15Q8N5U1 240 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 NARFQ9UHQ1 456 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 DAGLAQ9Y4D2 1042 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 PRRG1O14668 218 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 F10P00742 488 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ESR1P03372 595 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 SLC25A52Q3SY17 297 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 DNAJC22Q8N4W6 341 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 BBS1Q8NFJ9 593 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TTLQ8NG68 377 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TESCQ96BS2 214 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 SH3YL1Q96HL8 342 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 TREX2Q9BQ50 279 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 NPLQ9BXD5 320 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.55□□□□□ -1.04
TTC28-208ENST00000612946 CPVLQ9H3G5 476 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 PTCH2Q9Y6C5 1203 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 MON2Q7Z3U7 1717 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 KIAA0513O60268 411 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 FARS2O95363 451 aaKnown RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 FAM86B2P0C5J1 330 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 RFX3P48380 749 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 RFX5P48382 616 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 CPT1AP50416 773 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 DLX5P56178 289 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ZNF460Q14592 562 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 MINDY1Q8N5J2 469 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 OR2M4Q96R27 311 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 CYP2S1Q96SQ9 504 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LGMNQ99538 433 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 KATNBL1Q9H079 304 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 C20orf202A1L168 122 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CKMT2P17540 419 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 MAP3K8P41279 467 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 TMEM69Q5SWH9 247 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 OR2T11Q8NH01 316 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 SNRNP25Q9BV90 132 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 MEAF6Q9HAF1 191 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 KCNJ16Q9NPI9 418 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DNAJC5BQ9UF47 199 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZNF225Q9UK10 706 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 FBXL21Q9UKT6 434 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 TCAF1Q9Y4C2 921 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 MEIOCA2RUB1 952 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 FAAHO00519 579 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 SCAF4O95104 1147 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 TXNP10599 105 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 MSX2P35548 267 aaPredicted RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 RBMXP38159 391 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ALDH3B1P43353 468 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CDC20Q12834 499 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 TEX44Q53QW1 395 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 KCNIP4Q6PIL6 250 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 DNERQ8NFT8 737 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ST6GALNAC4Q9H4F1 302 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 TMEM181Q9P2C4 612 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ARL5AQ9Y689 179 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 IQCMA0A1B0GVH7 501 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CLDN24A6NM45 220 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 MUSKO15146 869 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ITGAMP11215 1152 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 UBE2UQ5VVX9 321 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 CMC1Q7Z7K0 106 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 SLC35F3Q8IY50 421 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 BEND7Q8N7W2 519 aaPredicted RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 STYXQ8WUJ0 223 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 POP1Q99575 1024 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ELAC1Q9H777 363 aaKnown RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 NDRG3Q9UGV2 375 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 MN1Q10571 1320 aaPredicted RBP8.54□□□□□ -1.04
TTC28-208ENST00000612946 ANKRD34BA5PLL1 514 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 ZNF487B1APH4 448 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 FFAR3O14843 346 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 GPR42O15529 346 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 UBXN7O94888 489 aa8.54□□□□□ -1.04
TTC28-208ENST00000612946 PGAM2P15259 253 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms