RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ZNF438Q7Z4V0 828 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 ANKRD13BQ86YJ7 626 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TMEM102Q8N9M5 508 aaPredicted RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 RAD51AP1Q96B01 352 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 NACC2Q96BF6 587 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF486Q96H40 463 aaPredicted RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 BRINP2Q9C0B6 783 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 FBRSL1Q9HCM7 1045 aaKnown RBP10.53□□□□□ -0.72
FAM3A-221ENST00000612856 AHSPQ9NZD4 102 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 ANAPC2Q9UJX6 822 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 TBC1D30Q9Y2I9 924 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 UGT2A1Q9Y4X1 527 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 USP3Q9Y6I4 520 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 MYO18BQ8IUG5 2567 aa10.53□□□□□ -0.72
FAM3A-221ENST00000612856 A0A087X1B8 175 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 PRSS51A0A1B0GVH4 220 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 KPNA5O15131 536 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 IPO13O94829 963 aaKnown RBP10.52□□□□□ -0.72
FAM3A-221ENST00000612856 TSHRP16473 764 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 JUNDP17535 347 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 DNAJB1P25685 340 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 VIPR1P32241 457 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 CD68P34810 354 aaPredicted RBP10.52□□□□□ -0.72
FAM3A-221ENST00000612856 DPP6P42658 865 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 PTGER3P43115 390 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 TXNL4AP83876 142 aaKnown RBP10.52□□□□□ -0.72
FAM3A-221ENST00000612856 NFE2L1Q14494 772 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 MEP1AQ16819 746 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 DEFB110Q30KQ9 67 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 PDE12Q6L8Q7 609 aaKnown RBP10.52□□□□□ -0.72
FAM3A-221ENST00000612856 USP43Q70EL4 1123 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF534Q76KX8 674 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 R3HCC1LQ7Z5L2 792 aaKnown RBP10.52□□□□□ -0.72
FAM3A-221ENST00000612856 ZDHHC13Q8IUH4 622 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 LILRB4Q8NHJ6 448 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 FIBINQ8TAL6 211 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 S100ZQ8WXG8 99 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF597Q96LX8 424 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 ALPK1Q96QP1 1244 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 CSNK1G1Q9HCP0 422 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 C12orf4Q9NQ89 552 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 STOX2Q9P2F5 926 aaPredicted RBP10.52□□□□□ -0.72
FAM3A-221ENST00000612856 POLG2Q9UHN1 485 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 NDUFAF1Q9Y375 327 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 PIEZO1Q92508 2521 aa10.52□□□□□ -0.72
FAM3A-221ENST00000612856 FADS2O95864 444 aaKnown RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ITIH1P19827 911 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 HOXD9P28356 352 aaPredicted RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 CHRNB3Q05901 458 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 TEAD4Q15561 434 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 RALGPS2Q86X27 583 aaPredicted RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 KRT78Q8N1N4 520 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ACVR1CQ8NER5 493 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ATP6V1C2Q8NEY4 427 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 SH3YL1Q96HL8 342 aaPredicted RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 C1orf74Q96LT6 269 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 GAL3ST4Q96RP7 486 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 KCNA7Q96RP8 456 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ZNF717Q9BY31 904 aaPredicted RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 TRIT1Q9H3H1 467 aaKnown RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 GDE1Q9NZC3 331 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 PLXNA1Q9UIW2 1896 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 CCDC154A6NI56 674 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 H7BY64 318 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 MEN1O00255 615 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 TSPAN4O14817 238 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 HCAR3P49019 387 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 DMC1Q14565 340 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 SYT16Q17RD7 645 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ZCCHC8Q6NZY4 707 aaKnown RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 GALNT5Q7Z7M9 940 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 LRRTM4Q86VH4 590 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 CARM1Q86X55 608 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 PIANPQ8IYJ0 282 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ZNF420Q8TAQ5 688 aaPredicted RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ACMSDQ8TDX5 336 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ATL1Q8WXF7 558 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 NXPE3Q969Y0 559 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 DNAJA3Q96EY1 480 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 PRAP1Q96NZ9 151 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 DPYSL5Q9BPU6 564 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 CNPPD1Q9BV87 410 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 FUNDC2Q9BWH2 189 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 TDRD1Q9BXT4 1180 aaKnown RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 CCDC177Q9NQR7 707 aaPredicted RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 PAQR5Q9NXK6 330 aaPredicted RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ENTPD4Q9Y227 616 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 TNPO3Q9Y5L0 923 aaKnown RBP10.52□□□□□ -0.73
FAM3A-221ENST00000612856 ABCA7Q8IZY2 2146 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 SHROOM3Q8TF72 1996 aa10.52□□□□□ -0.73
FAM3A-221ENST00000612856 A0A0J9YYE9 177 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 DYRK3O43781 588 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 CPNE3O75131 537 aaKnown RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 SEMA4FO95754 770 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 CRYZL1O95825 349 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 TRBC1P01850 177 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ESR1P03372 595 aa10.51□□□□□ -0.73
FAM3A-221ENST00000612856 ATP1B2P14415 290 aaPredicted RBP10.51□□□□□ -0.73
FAM3A-221ENST00000612856 CLCN4P51793 760 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms