RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ADAM10O14672 748 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 PRMT5O14744 637 aaPredicted RBP16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 KPNA5O15131 536 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 MFAP3LO75121 409 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 TJP3O95049 919 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 PTMAP06454 111 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 CYC1P08574 325 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 DNAJA1P31689 397 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 CTNNA1P35221 906 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 PTPN7P35236 360 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 CETN2P41208 172 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 PPP2R2AP63151 447 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 CDH17Q12864 832 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 NDUFA9Q16795 377 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 TSTD2Q5T7W7 516 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 SUSD1Q6UWL2 747 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 ZNF534Q76KX8 674 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 OTOAQ7RTW8 1153 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 LDB1Q86U70 411 aaPredicted RBP16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 SLC5A8Q8N695 610 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 SYNPO2LQ9H987 977 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 PCYOX1Q9UHG3 505 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 GNPTGQ9UJJ9 305 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 NIPBLQ6KC79 2804 aaeCLIP16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 PRRC2AP48634 2157 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 FAM221AA4D161 298 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 TPOP07202 933 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 SP1P08047 785 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 PKMP14618 531 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 EZRP15311 586 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 IGFBP2P18065 325 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 MAGEA1P43355 309 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 AGTR2P50052 363 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 FAM53BQ14153 422 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 EXT1Q16394 746 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 MAPKAPK3Q16644 382 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 CEP128Q6ZU80 1094 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 ADCK2Q7Z695 626 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 CD163Q86VB7 1156 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 PAQR7Q86WK9 346 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 ASB5Q8WWX0 329 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 SMPDL3AQ92484 453 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 NRGNQ92686 78 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 CYTH2Q99418 400 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 NPDC1Q9NQX5 325 aaPredicted RBP16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 CATSPERZQ9NTU4 200 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 LRFN1Q9P244 771 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 R3HDM2Q9Y2K5 976 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 ASB1Q9Y576 335 aa16.23■□□□□ 0.19
CSNK1E-215ENST00000612795 SYCE3A1L190 88 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 NKX2-6A6NCS4 301 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 P2RX6O15547 441 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 MAN1A2O60476 641 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 FAM155BO75949 473 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 CCNDBP1O95273 360 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 TTPAP49638 278 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 IST1P53990 364 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 TAS2R50P59544 299 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 MYBPHQ13203 477 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 CES4AQ5XG92 561 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 SLC25A25Q6KCM7 469 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 PPP1R21Q6ZMI0 780 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 ANKRD37Q7Z713 158 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 TGIF2LYQ8IUE0 185 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 CHERPQ8IWX8 916 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 CPSF7Q8N684 471 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 OR9A4Q8NGU2 314 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 M1APQ8TC57 530 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 OR2A5Q96R48 311 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 NPAS2Q99743 824 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 MMP25Q9NPA2 562 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 TAC3Q9UHF0 121 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 RIMKLBQ9ULI2 386 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 PCDHA3Q9Y5H8 950 aa16.22■□□□□ 0.19
CSNK1E-215ENST00000612795 ABCA4P78363 2273 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 IGKV1-8A0A0C4DH67 115 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 GOLGA6L9A6NEM1 432 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 SOWAHDA6NJG2 315 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 H0YIG0 161 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 TFECO14948 347 aaPredicted RBP16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 SLC25A12O75746 678 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 NEURL1O76050 574 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 ZWINTO95229 277 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 CHRNB4P30926 498 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 PTGER1P34995 402 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 PTGS2P35354 604 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 XCR1P46094 333 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 GDF10P55107 478 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 ACVR1Q04771 509 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 PTK6Q13882 451 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 ICE2Q659A1 982 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 TMEM211Q6ICI0 200 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 ZNF425Q6IV72 752 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 AADACL2Q6P093 401 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 PAPD4Q6PIY7 484 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 FGD2Q7Z6J4 655 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 DMRTC2Q8IXT2 367 aaPredicted RBP16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 ARHGEF39Q8N4T4 335 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 OR9A1PQ8NGU1 263 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 FAM57AQ8TBR7 257 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms