RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SH2B3Q9UQQ2 575 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 SIT1Q9Y3P8 196 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 TSC22D4Q9Y3Q8 395 aa8.59□□□□□ -1.03
CCDC47-207ENST00000612558 POLR3HQ9Y535 204 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-207ENST00000612558 GOLGA4Q13439 2230 aaKnown RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 A0A1W2PPV9 198 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 PIPSLA2A3N6 862 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CCDC154A6NI56 674 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 MAGEB17A8MXT2 336 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 FOXE1O00358 373 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ANKRD28O15084 1053 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CFLARO15519 480 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ATP6V1G2O95670 118 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 THEGLP0DJG4 465 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 PCNAP12004 261 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 BCKDHAP12694 445 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CDH1P12830 882 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 AMD1P17707 334 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CAPN3P20807 821 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CXCR2P25025 360 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CD27P26842 260 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 AK4P27144 223 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 IL12AP29459 219 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 PKLRP30613 574 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ACTR1BP42025 376 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CXCL12P48061 93 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 MTTPP55157 894 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ACTR1AP61163 376 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 PSME3P61289 254 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ILF3Q12906 894 aaKnown RBP eCLIP8.58□□□□□ -1.048e-6■■□□□ 11.6
CCDC47-207ENST00000612558 MTAPQ13126 283 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 DDX39BQ13838 428 aaKnown RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 SLBPQ14493 270 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 TRMT5Q32P41 509 aaKnown RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 USP39Q53GS9 565 aaKnown RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 SLC30A9Q6PML9 568 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 BNC2Q6ZN30 1099 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 FAM129CQ86XR2 697 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 DCP2Q8IU60 420 aaKnown RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 KRT78Q8N1N4 520 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 LIX1Q8N485 282 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 GLB1L3Q8NCI6 653 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 GALNT6Q8NCL4 622 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ABHD11Q8NFV4 315 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 OR52E1Q8NGJ3 308 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CCL4L1Q8NHW4 92 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 HUS1BQ8NHY5 278 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 GPBAR1Q8TDU6 330 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 SNX19Q92543 992 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 KLHDC7BQ96G42 594 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 APIPQ96GX9 242 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ZBTB18Q99592 522 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ORAI3Q9BRQ5 295 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ACAT2Q9BWD1 397 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 ACTL8Q9H568 366 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 KIR3DX1Q9H7L2 352 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 PELI2Q9HAT8 420 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 GID8Q9NWU2 228 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 NMRK1Q9NWW6 199 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 TAC3Q9UHF0 121 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 BAIAP2L1Q9UHR4 511 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 LEF1Q9UJU2 399 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-207ENST00000612558 CROTQ9UKG9 612 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 PCDHGA7Q9Y5G6 932 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 HEATR5BQ9P2D3 2071 aa8.58□□□□□ -1.04
CCDC47-207ENST00000612558 A6NCN8 305 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 C9JVG2 144 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 ENTPD5O75356 428 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 EEDO75530 441 aaKnown RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 F3P13726 295 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 GPC1P35052 558 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PIK3CBP42338 1070 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PXNP49023 591 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 BLKP51451 505 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 CCR8P51685 355 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 CLDN8P56748 225 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PHEXP78562 749 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 ACSM2AQ08AH3 577 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 EIF2B5Q13144 721 aaKnown RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 FZD2Q14332 565 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 PTGR1Q14914 329 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 KPNB1Q14974 876 aaKnown RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 SNCBQ16143 134 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 C1orf146Q5VVC0 180 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 ACSM2BQ68CK6 577 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 NOXRED1Q6NXP6 359 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 C8orf82Q6P1X6 216 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 NRROSQ86YC3 692 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 MFSD2AQ8NA29 543 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 LINC01555Q8NAE3 123 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 WDR60Q8WVS4 1066 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 VPS33AQ96AX1 596 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 CXorf40BQ96DE9 158 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 ZNF837Q96EG3 531 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 FCRL1Q96LA6 429 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 NRTNQ99748 197 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 HOPXQ9BPY8 73 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-207ENST00000612558 AIF1LQ9BQI0 150 aa8.57□□□□□ -1.04
CCDC47-207ENST00000612558 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms