RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 FBLIM1Q8WUP2 373 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 ZNF566Q969W8 418 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 SH3KBP1Q96B97 665 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 TIFAQ96CG3 184 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 HEPHQ9BQS7 1158 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 DUSP26Q9BV47 211 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 FAIMQ9NVQ4 179 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 SPATA6Q9NWH7 488 aaPredicted RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 TPRKBQ9Y3C4 175 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 NAALAD2Q9Y3Q0 740 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 PLXNA2O75051 1894 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 CARNS1A5YM72 827 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 XPAP23025 273 aaPredicted RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 CLK3P49761 638 aaKnown RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 EMX1Q04741 257 aaPredicted RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 KEAP1Q14145 624 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 SPCS2Q15005 226 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 KDM4DQ6B0I6 523 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 EIF3MQ7L2H7 374 aaKnown RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 CYB5D2Q8WUJ1 264 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 STARD8Q92502 1023 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 TPD52L3Q96J77 140 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 TPT1P8Q9HAU6 139 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 TBCCD1Q9NVR7 557 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 SCN3BQ9NY72 215 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 ENPP5Q9UJA9 477 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 ERVK-11Q9UQG0 969 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 TDRKHQ9Y2W6 561 aaKnown RBP16.65■□□□□ 0.26
NEK3-206ENST00000611833 PCDHB11Q9Y5F2 797 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 DGKBQ9Y6T7 804 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 PTPRSQ13332 1948 aa16.65■□□□□ 0.26
NEK3-206ENST00000611833 J3QRK9 145 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 TSPAN6O43657 245 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 PSIP1O75475 530 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 HNRNPCP07910 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
NEK3-206ENST00000611833 HNF4AP41235 474 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 PREPP48147 710 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 GP2P55259 537 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 DCDC1P59894 354 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 ZNF284Q2VY69 593 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 ARSIQ5FYB1 569 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 HENMT1Q5T8I9 393 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 CPTPQ5TA50 214 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 GRHL2Q6ISB3 625 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 DUS1LQ6P1R4 473 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 CBLL1Q75N03 491 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 B3GNT8Q7Z7M8 397 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 TRAM1L1Q8N609 369 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 SLC15A4Q8N697 577 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 TTC29Q8NA56 475 aaPredicted RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 ATG16L2Q8NAA4 619 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 KLHL23Q8NBE8 558 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 VPS37AQ8NEZ2 397 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 RORBQ92753 470 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 FOXJ1Q92949 421 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 PPP1R14BQ96C90 147 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 APOL4Q9BPW4 351 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 MTG2Q9H4K7 406 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 REEP1Q9H902 201 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 SPHK2Q9NRA0 654 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 STOX2Q9P2F5 926 aaPredicted RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 ERVK-18Q9QC07 812 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 AASSQ9UDR5 926 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 ERVW-1Q9UQF0 538 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 PRRC2BQ5JSZ5 2229 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 TTC34A8MYJ7 566 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 M0QX08 132 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 QSOX1O00391 747 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 SCAMP2O15127 329 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 YY2O15391 372 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 MAN1A2O60476 641 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 MOSPD3O75425 235 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 CATP04040 527 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 ANXA4P09525 319 aaPredicted RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 AQP6Q13520 282 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 NPTX1Q15818 432 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 CCSMST1Q4G0I0 132 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 LY6G5CQ5SRR4 150 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 PDE12Q6L8Q7 609 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 CAPN13Q6MZZ7 669 aaPredicted RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 SLC16A12Q6ZSM3 486 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 ANKRD13BQ86YJ7 626 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 C1orf52Q8N6N3 182 aaKnown RBP16.64■□□□□ 0.25
NEK3-206ENST00000611833 RNF217Q8TC41 542 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 ZSCAN5AQ9BUG6 496 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 KRT84Q9NSB2 600 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 TDP1Q9NUW8 608 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 FZD4Q9ULV1 537 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 BTBD3Q9Y2F9 522 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 HSPE1-MOB4S4R3N1 261 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 PDE4DIPQ5VU43 2346 aa16.64■□□□□ 0.25
NEK3-206ENST00000611833 H0YIV9 168 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 RFPL2O75678 378 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 SEMG1P04279 462 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 CTSLP07711 333 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 ZNF12P17014 697 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 ASMTP46597 345 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 BDKRB1P46663 353 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 PHEXP78562 749 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 HKDC1Q2TB90 917 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms