RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SLC1A3P43003 542 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SERPINB9P50453 376 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TNNC1P63316 161 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 MRPS9P82933 396 aaKnown RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PCDH1Q08174 1060 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ABRQ12979 859 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ITGADQ13349 1161 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 KRT31Q15323 416 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM83EQ2M2I3 478 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM119Q4V9L6 283 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SFT2D3Q587I9 215 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 KRT79Q5XKE5 535 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 NADSYN1Q6IA69 706 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TTC27Q6P3X3 843 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CAMKMTQ7Z624 323 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 DHDDSQ86SQ9 333 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF34Q8IZ26 560 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 BATF2Q8N1L9 274 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PDPRQ8NCN5 879 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF461Q8TAF7 563 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 RAET1EQ8TD07 263 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF398Q8TD17 642 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 DPF1Q92782 380 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 MCUR1Q96AQ8 359 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 RASD2Q96D21 266 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 KLHDC7BQ96G42 594 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 C5orf34Q96MH7 638 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 FIZ1Q96SL8 496 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM109Q9BVC6 243 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 GPR87Q9BY21 358 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 MAGT1Q9H0U3 335 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 C12orf65Q9H3J6 166 aaKnown RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 WDR55Q9H6Y2 383 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SMURF2Q9HAU4 748 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 GP6Q9HCN6 339 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 FBXO34Q9NWN3 711 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PLA2G3Q9NZ20 509 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 VSX1Q9NZR4 365 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 GDAQ9Y2T3 454 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PCDHA2Q9Y5H9 948 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 DOT1LQ8TEK3 1739 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 COL15A1P39059 1388 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF532Q9HCE3 1301 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 KBTBD13C9JR72 458 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RAB27BO00194 218 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PSMD12O00232 456 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PGRMC1O00264 195 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SOX1O00570 391 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 HS3ST1O14792 307 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GMDSO60547 372 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GH2P01242 217 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RAB3AP20336 220 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CD1BP29016 333 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 AQP4P55087 323 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 NCKAP1LP55160 1127 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 YWHAGP61981 247 aaKnown RBP eCLIP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RPL10AP62906 217 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FLI1Q01543 452 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CLCA4Q14CN2 919 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 HNRNPA1L2Q32P51 320 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC25A25Q6KCM7 469 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CGB2Q6NT52 195 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 KIAA0408Q6ZU52 694 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GPRIN1Q7Z2K8 1008 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF551Q7Z340 670 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 IGFN1Q86VF2 1251 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CYP4Z1Q86W10 505 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RCOR2Q8IZ40 523 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CLEC4FQ8N1N0 589 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ARHGEF39Q8N4T4 335 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FIBCD1Q8N539 461 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FBXW5Q969U6 566 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ISOC1Q96CN7 298 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ERLEC1Q96DZ1 483 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MAGEB18Q96M61 343 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 DOK1Q99704 481 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 C1orf50Q9BV19 199 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 CDADC1Q9BWV3 514 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 JAM3Q9BX67 310 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GOLPH3Q9H4A6 298 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 WSB2Q9NYS7 404 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 NPAP1Q9NZP6 1156 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 NYAP2Q9P242 653 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FBXL17Q9UF56 701 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 TRMT6Q9UJA5 497 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 DBNLQ9UJU6 430 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PADI2Q9Y2J8 665 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PCDHAC2Q9Y5I4 1007 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 COPG1Q9Y678 874 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 DUSP10Q9Y6W6 482 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 COL5A3P25940 1745 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MAP2P11137 1827 aaKnown RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ELOA3CA0A087WX78 387 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A1W2PQF6 199 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A1W2PRG6 482 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ELOA3DA6NLF2 546 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MATN3O15232 486 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 RGS16O15492 202 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ADAM12O43184 909 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms