RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TP53BP1Q12888 1972 aaPredicted RBP16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 PDK3Q15120 406 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 ANGPT1Q15389 498 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 SHBQ15464 509 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 LIN52Q52LA3 116 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 ZFP1Q6P2D0 407 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 LCTLQ6UWM7 567 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 ZNF740Q8NDX6 193 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 OR4E2Q8NGC2 313 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 SLC5A11Q8WWX8 675 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 SMPDL3AQ92484 453 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 USP7Q93009 1102 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 SLC29A3Q9BZD2 475 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 WDR41Q9HAD4 459 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 CCL27Q9Y4X3 112 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 KCNE2Q9Y6J6 123 aa16.7■□□□□ 0.26
PPFIA3-207ENST00000602716 A0A1B0GTW7 788 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 BTN3A3O00478 584 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 PIAS2O75928 621 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 PDYNP01213 254 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 FOLH1Q04609 750 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 SLBPQ14493 270 aaKnown RBP eCLIP16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 UGT2A3Q6UWM9 527 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 CEP68Q76N32 757 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 TMEM126BQ8IUX1 230 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 LCN9Q8WX39 176 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 TUBGCP3Q96CW5 907 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 CENPKQ9BS16 269 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 EFCAB1Q9HAE3 211 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 GPRC5BQ9NZH0 403 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 ZNF490Q9ULM2 529 aaPredicted RBP16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 DYRK1BQ9Y463 629 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 COLEC10Q9Y6Z7 277 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 MYO15AQ9UKN7 3530 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 TDRD6O60522 2096 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 ARHGEF17Q96PE2 2063 aaPredicted RBP16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 IGKV1-8A0A0C4DH67 115 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 PATE3B3GLJ2 98 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 AQP9O43315 295 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 CHEK2O96017 543 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 MRPS22P82650 360 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 MS4A2Q01362 244 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 BNIP3Q12983 259 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 E2F2Q14209 437 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 ELOCQ15369 112 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 GRHL2Q6ISB3 625 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 BMP8AQ7Z5Y6 402 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 TRIM48Q8IWZ4 208 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 OR2A1Q8NGT9 310 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 ACPTQ9BZG2 426 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 RIMS3Q9UJD0 308 aa16.69■□□□□ 0.26
PPFIA3-207ENST00000602716 CFLARO15519 480 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 DENRO43583 198 aaKnown RBP16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 PRICKLE3O43900 615 aaPredicted RBP16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 BCAS2O75934 225 aaPredicted RBP16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 PRR35P0CG20 571 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 ME2P23368 584 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 CHN2P52757 468 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 POLE2P56282 527 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 PCDH1Q08174 1060 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 ART3Q13508 389 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 DDX39BQ13838 428 aaKnown RBP16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 PLCL1Q15111 1095 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 NXPE4Q6UWF7 544 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 AMIGO1Q86WK6 493 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 ADGRF3Q8IZF5 1079 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 CEP70Q8NHQ1 597 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 HMGCLL1Q8TB92 370 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 SH3KBP1Q96B97 665 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 SH3GL3Q99963 347 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 C1orf50Q9BV19 199 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 POT1Q9NUX5 634 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 SPASTQ9UBP0 616 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 KLHL20Q9Y2M5 609 aa16.68■□□□□ 0.26
PPFIA3-207ENST00000602716 NOBOXO60393 691 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 VIPP01282 170 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 CHRM5P08912 532 aaPredicted RBP16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 HOXB3P14651 431 aaPredicted RBP16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 HSD17B2P37059 387 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 HNRNPKP61978 463 aaKnown RBP eCLIP16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 TLR1Q15399 786 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 CNPY1Q3B7I2 92 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 LIPJQ5W064 366 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 ATG9BQ674R7 924 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 CHSY3Q70JA7 882 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 EFL1Q7Z2Z2 1120 aaKnown RBP16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 TRIM73Q86UV7 250 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 MARVELD2Q8N4S9 558 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 ZBTB44Q8NCP5 570 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 BHLHE22Q8NFJ8 381 aaPredicted RBP16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 WDR20Q8TBZ3 569 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 NCSTNQ92542 709 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 WDR34Q96EX3 536 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 RAB11FIP5Q9BXF6 653 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 ELOVL6Q9H5J4 265 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 SLC6A20Q9NP91 592 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 ZSCAN32Q9NX65 697 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 KMT2EQ8IZD2 1858 aa16.67■□□□□ 0.26
PPFIA3-207ENST00000602716 KIR2DS5A0A0G2JLQ3 304 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms