RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 EPOP01588 193 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 TYMPP19971 482 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 ITPKAP23677 461 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 GZMMP51124 257 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 CD83Q01151 205 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 ABHD18Q0P651 414 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 SLAMF1Q13291 335 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 TRAF7Q6Q0C0 670 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 ADGRG2Q8IZP9 1017 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 BCL7BQ9BQE9 202 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 KCNH6Q9H252 994 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 ASB8Q9H765 288 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 DHRS7Q9Y394 339 aa17.77■□□□□ 0.43
UPF1-210ENST00000600689 GRXCR2A6NFK2 248 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 ADORA3P0DMS8 318 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 MAD2L1Q13257 205 aaPredicted RBP17.76■□□□□ 0.43
UPF1-210ENST00000600689 UAP1L1Q3KQV9 507 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 SLC46A3Q7Z3Q1 461 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 CALHM3Q86XJ0 350 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 DENND1CQ8IV53 801 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 PATJQ8NI35 1801 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 TP53INP1Q96A56 240 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 PDLIM5Q96HC4 596 aaKnown RBP17.76■□□□□ 0.43
UPF1-210ENST00000600689 IMPAD1Q9NX62 359 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 KLHL20Q9Y2M5 609 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 AOC2O75106 756 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 CKMT1AP12532 417 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 SGSHP51688 502 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 DSC1Q08554 894 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 VMACQ2NL98 169 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 SMUG1Q53HV7 270 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 SLC24A5Q71RS6 500 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 ZNF605Q86T29 641 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 SLC5A8Q8N695 610 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 BEND7Q8N7W2 519 aaPredicted RBP17.76■□□□□ 0.43
UPF1-210ENST00000600689 PCSK9Q8NBP7 692 aaKnown RBP17.76■□□□□ 0.43
UPF1-210ENST00000600689 GLB1L3Q8NCI6 653 aaPredicted RBP17.76■□□□□ 0.43
UPF1-210ENST00000600689 CLIP3Q96DZ5 547 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 CD244Q9BZW8 370 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 ARL15Q9NXU5 204 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 TAS2R9Q9NYW1 312 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 RAPGEFL1Q9UHV5 662 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 DUSP12Q9UNI6 340 aa17.76■□□□□ 0.43
UPF1-210ENST00000600689 TRBV5-3A0A0A0MS03 114 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 PRAMEF1O95521 474 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 ESR1P03372 595 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 EIF2S1P05198 315 aaKnown RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 SDC1P18827 310 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 PIK3CBP42338 1070 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 HTR3AP46098 478 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 CDH12P55289 794 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 CXCR4P61073 352 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 TUBA1BP68363 451 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 FADDQ13158 208 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 INO80DQ53TQ3 878 aaPredicted RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 LYPD8Q6UX82 237 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 TUBA1AQ71U36 451 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 SLC44A2Q8IWA5 706 aaPredicted RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 CADM2Q8N3J6 435 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 KBTBD8Q8NFY9 601 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 EID2BQ96D98 161 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 TLR8Q9NR97 1041 aaKnown RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 RHCGQ9UBD6 479 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 NUFIP1Q9UHK0 495 aaKnown RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 MUTYHQ9UIF7 546 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 FNDC1Q4ZHG4 1894 aaPredicted RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 CCL23P55773 120 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 FAM26DQ5JW98 314 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 OR9Q2Q8NGE9 314 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 ATG10Q9H0Y0 220 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 MS4A12Q9NXJ0 267 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 PTGER3P43115 390 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 KIR3DL1P43629 444 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 RGS6P49758 472 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 ZNF45Q02386 682 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 ZNF517Q6ZMY9 492 aaPredicted RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 IPCEF1Q8WWN9 437 aaPredicted RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 NIPSNAP1Q9BPW8 284 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 MGME1Q9BQP7 344 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 TRPV5Q9NQA5 729 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 SNTG1Q9NSN8 517 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 SPASTQ9UBP0 616 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 SCML2Q9UQR0 700 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 VPS9D1Q9Y2B5 631 aa17.75■□□□□ 0.43
UPF1-210ENST00000600689 FCF1Q9Y324 198 aaKnown RBP17.75■□□□□ 0.43
UPF1-210ENST00000600689 VWA8A3KMH1 1905 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 WWP2O00308 870 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 KCNK5O95279 499 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 COX7A2P14406 83 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 PTPN2P17706 415 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 CST5P28325 142 aaPredicted RBP17.74■□□□□ 0.43
UPF1-210ENST00000600689 RGS4P49798 205 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 UGT2B15P54855 530 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 ZNF544Q6NX49 715 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 SYT12Q8IV01 421 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 GPR151Q8TDV0 419 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 MYDGFQ969H8 173 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 YME1L1Q96TA2 773 aa17.74■□□□□ 0.43
UPF1-210ENST00000600689 PHOX2BQ99453 314 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms