RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 EEF1DP29692 281 aaKnown RBP18.5■□□□□ 0.55
UPF1-209ENST00000600310 VSX2P58304 361 aaPredicted RBP18.5■□□□□ 0.55
UPF1-209ENST00000600310 ARF3P61204 181 aaPredicted RBP18.5■□□□□ 0.55
UPF1-209ENST00000600310 REEP5Q00765 189 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 WASHC2DQ5SRD0 308 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 PRAMEF17Q5VTA0 474 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 PRAMEF9Q5VWM5 478 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 ATG9BQ674R7 924 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 ZFAND4Q86XD8 727 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 TEX9Q8N6V9 391 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 WDR34Q96EX3 536 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 AIF1LQ9BQI0 150 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 CENPHQ9H3R5 247 aa18.5■□□□□ 0.55
UPF1-209ENST00000600310 FEZF1A0PJY2 475 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 FITM1A5D6W6 292 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 G3V2L1 256 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 STMND1H3BQB6 276 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 ZNF749O43361 778 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 LCMT2O60294 686 aaKnown RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 H2AFYO75367 372 aaKnown RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 MYZAPP0CAP1 466 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 CREB1P16220 341 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 VARSP26640 1264 aaKnown RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 BCL6P41182 706 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 PIK3CGP48736 1102 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 PRKAA2P54646 552 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 PCBP4P57723 403 aaKnown RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 MEF2AQ02078 507 aaPredicted RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 E2F2Q14209 437 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 MAP7Q14244 749 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 GRM7Q14831 915 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 TBCCQ15814 346 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 PRTGQ2VWP7 1150 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 ZYG11AQ6WRX3 759 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 HDXQ7Z353 690 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 EXOC3L1Q86VI1 746 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 DTX1Q86Y01 620 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 SLC22A9Q8IVM8 553 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 TBC1D19Q8N5T2 526 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 ZNF655Q8N720 491 aaPredicted RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 KDF1Q8NAX2 398 aaPredicted RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 MFSD9Q8NBP5 474 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 RDH11Q8TC12 318 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 RERGQ96A58 199 aaPredicted RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 ZBTB9Q96C00 473 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 RUFY1Q96T51 708 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 C1QTNF3Q9BXJ4 246 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 IQCGQ9H095 443 aaKnown RBP18.49■□□□□ 0.55
UPF1-209ENST00000600310 SPNS1Q9H2V7 528 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 IRAK4Q9NWZ3 460 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 ANGPTL3Q9Y5C1 460 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 PCDHGA4Q9Y5G9 962 aa18.49■□□□□ 0.55
UPF1-209ENST00000600310 FRYQ5TBA9 3013 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 CPNE3O75131 537 aaKnown RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 SPAG7O75391 227 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 KATNA1O75449 491 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 NTRK1P04629 796 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 RPS17P08708 135 aaKnown RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 HBQ1P09105 142 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 CXCR2P25025 360 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 CASP2P42575 452 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 GCGRP47871 477 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 SCTRP47872 440 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 HERVK_113P63132 956 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 IRF8Q02556 426 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 GTF2H2Q13888 395 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 XKR6Q5GH73 641 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 YOD1Q5VVQ6 348 aaPredicted RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 GTF2H2CQ6P1K8 395 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 TIPARPQ7Z3E1 657 aaKnown RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 GOLGA7Q7Z5G4 137 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 VN1R4Q7Z5H5 301 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 CSNK1A1LQ8N752 337 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 ZNF740Q8NDX6 193 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 ZCCHC14Q8WYQ9 949 aaKnown RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 CCDC126Q96EE4 140 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 LRFN5Q96NI6 719 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 ERVK-6Q9BXR3 956 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 PITHD1Q9GZP4 211 aaPredicted RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 STMN4Q9H169 189 aaPredicted RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 C12orf65Q9H3J6 166 aaKnown RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 NT5DC2Q9H857 520 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 ACTR5Q9H9F9 607 aaPredicted RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 GEMIN8Q9NWZ8 242 aaKnown RBP18.48■□□□□ 0.55
UPF1-209ENST00000600310 COPG2Q9UBF2 871 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 MID2Q9UJV3 735 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 PCTPQ9UKL6 214 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 SRPK3Q9UPE1 567 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 ACTL7BQ9Y614 415 aa18.48■□□□□ 0.55
UPF1-209ENST00000600310 CEP295Q9C0D2 2601 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 HEATR5BQ9P2D3 2071 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 AGPSO00116 658 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 TXNDC9O14530 226 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 OR1F1O43749 312 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 TYROBPO43914 113 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 RAD1O60671 282 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 WFS1O76024 890 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 EIF2S1P05198 315 aaKnown RBP18.47■□□□□ 0.55
UPF1-209ENST00000600310 MYL2P10916 166 aa18.47■□□□□ 0.55
UPF1-209ENST00000600310 LIPCP11150 499 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms