RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ARL13AQ5H913 290 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 GRHL2Q6ISB3 625 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 LETMD1Q6P1Q0 360 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 ADCK2Q7Z695 626 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 SYVN1Q86TM6 617 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 LAS2Q8IYD9 372 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 BMPERQ8N8U9 685 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 OR4F6Q8NGB9 312 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 ZNF285Q96NJ3 590 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 OR2A5Q96R48 311 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 ZFYVE21Q9BQ24 234 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 STRADBQ9C0K7 418 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 SOHLH2Q9NX45 425 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 UNC13CQ8NB66 2214 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 ANKRD12Q6UB98 2062 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 CFAP54Q96N23 3096 aa12.12□□□□□ -0.47
CHMP2A-206ENST00000600118 A0A1W2PNU3 283 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 FEZF1A0PJY2 475 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 B4E171 279 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 H0YIV9 168 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 H3BMH7 237 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 ITM2AO43736 263 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 LCMT2O60294 686 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 SNNO75324 88 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 CHRNGP07510 517 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 CSTF2P33240 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TSPAN7P41732 249 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 ARL4DP49703 201 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 RPS15AP62244 130 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 BST1Q10588 318 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TARDBPQ13148 414 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 STX3Q13277 289 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 RBBP7Q16576 425 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 PAGE2BQ5JRK9 111 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TMTC4Q5T4D3 741 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TMIGD1Q6UXZ0 262 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 GPRIN3Q6ZVF9 776 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 VN1R4Q7Z5H5 301 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 MILR1Q7Z6M3 343 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 PLD3Q8IV08 490 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 MCATQ8IVS2 390 aaKnown RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TRIM42Q8IWZ5 723 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 GALNT15Q8N3T1 639 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 CHCHD4Q8N4Q1 142 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 ANKRD53Q8N9V6 530 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 MFSD9Q8NBP5 474 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 PPP1R14CQ8TAE6 165 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 CKAP2Q8WWK9 683 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 ATP6V1E2Q96A05 226 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 THAP11Q96EK4 314 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 PRR11Q96HE9 360 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 MAGEB10Q96LZ2 347 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 FCRL4Q96PJ5 515 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 CMKLR1Q99788 373 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 C20orf27Q9GZN8 174 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 RHBGQ9H310 441 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 MANSC1Q9H8J5 431 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 ZNF395Q9H8N7 513 aaPredicted RBP12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 MID1IP1Q9NPA3 183 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 OCIAD1Q9NX40 245 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TRPS1Q9UHF7 1281 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 PLCL2Q9UPR0 1127 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 TSC22D4Q9Y3Q8 395 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 LOXL2Q9Y4K0 774 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
CHMP2A-206ENST00000600118 CCDC187A0A096LP49 1063 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 LOC105369274A0A096LPK9 316 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 LOC102723532A0A0G2JNH3 316 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 A0A0J9YVX5 310 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 H0YGG7 62 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 MAP3K7O43318 606 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 SRPX2O60687 465 aaPredicted RBP12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 OR4F21O95013 312 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 ENO1P06733 434 aaKnown RBP12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 FGF4P08620 206 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 CCL4P13236 92 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 GSTM2P28161 218 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 GRK3P35626 688 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 AHRP35869 848 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 ARF3P61204 181 aaPredicted RBP12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 ABCE1P61221 599 aaKnown RBP12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 ACY1Q03154 408 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 DEFB110Q30KQ9 67 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 FRMPD2BQ6IN97 320 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 MED27Q6P2C8 311 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 VN1R5Q7Z5H4 357 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 CUZD1Q86UP6 607 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 OR4N4Q8N0Y3 316 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 OR7G3Q8NG95 312 aa12.1□□□□□ -0.47
CHMP2A-206ENST00000600118 FAM76AQ8TAV0 307 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms