RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	PRSS44	E7EML9	344 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SMAP	O00193	183 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	HNRNPR	O43390	633 aa	Known RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	LCMT2	O60294	686 aa	Known RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SEC24D	O94855	1032 aa	Predicted RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	UNC5C	O95185	931 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	FGG	P02679	453 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	TPSB2	P20231	275 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MAGEA6	P43360	314 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	RELA	Q04206	551 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CTBP1	Q13363	440 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ARHGAP19	Q14CB8	494 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	TPSAB1	Q15661	275 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	GARNL3	Q5VVW2	1013 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MRNIP	Q6NTE8	343 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	GFRAL	Q6UXV0	394 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	PDSS2	Q86YH6	399 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MCEMP1	Q8IX19	187 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	OTUD6B	Q8N6M0	293 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MVB12A	Q96EY5	273 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CCDC120	Q96HB5	630 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CYTH2	Q99418	400 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	HES7	Q9BYE0	225 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MKKS	Q9NPJ1	570 aa	Predicted RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ABCF3	Q9NUQ8	709 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	STMN3	Q9NZ72	180 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	COPG2	Q9UBF2	871 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ADAMTS6	Q9UKP5	1117 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	NEU2	Q9Y3R4	380 aa		10.43	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	AKAP9	Q99996	3911 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	TRGV8	A0A0C4DH27	118 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	DYTN	A2CJ06	578 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CTAGE15	A4D2H0	777 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580		H3BMM5	538 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	PRAMEF2	O60811	474 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	WFS1	O76024	890 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ERVK-10	P10266	1014 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	OGN	P20774	298 aa	Known RBP	10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CXCR2	P25025	360 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	IMPA1	P29218	277 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CXCR5	P32302	372 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SKIV2L2	P42285	1042 aa	Known RBP	10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	VPS41	P49754	854 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	PGGT1B	P53609	377 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	PER3	P56645	1201 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ADORA2A-AS1	P86434	159 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	H3F3C	Q6NXT2	135 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MBOAT1	Q6ZNC8	495 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	RIPOR1	Q6ZS17	1223 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	NEK10	Q6ZWH5	1172 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CTAGE6	Q86UF2	777 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CHERP	Q8IWX8	916 aa	Known RBP	10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ZNF295-AS1	Q8N0V1	137 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	RAB42	Q8N4Z0	105 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CD200R1	Q8TD46	325 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MAGEC3	Q8TD91	643 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ADAMTS18	Q8TE60	1221 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	TM4SF19	Q96DZ7	209 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	VPS50	Q96JG6	964 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SIGLEC12	Q96PQ1	595 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	DRC3	Q9H069	523 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	RNF32	Q9H0A6	362 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	C14orf105	Q9NVL8	296 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	RIC8B	Q9NVN3	520 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	ABI3	Q9P2A4	366 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	MRFAP1	Q9Y605	127 aa		10.42	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	KCNE1B	A0A087WTH5	132 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	FAM237B	A0A1B0GVD1	139 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	FEZF1	A0PJY2	475 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	OR5H15	A6NDH6	313 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580		A8MUI8	341 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	C19orf84	I3L1E1	186 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SGK494	L7N484	410 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CCL21	O00585	134 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	KIF5C	O60282	957 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	PHF2	O75151	1096 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	VPS26A	O75436	327 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	HAUS5	O94927	633 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SYF2	O95926	243 aa	Known RBP	10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	B3GALT4	O96024	378 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CAT	P04040	527 aa	Known RBP	10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	SNRPB2	P08579	225 aa	Known RBP	10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	C8orf89	P0DMQ9	161 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	EZR	P15311	586 aa	Known RBP	10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	IL1RN	P18510	177 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	FDXR	P22570	491 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	GABRB3	P28472	473 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	COIL	P38432	576 aa	Predicted RBP	10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CD96	P40200	585 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	BCL6	P41182	706 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CA7	P43166	264 aa		10.41	□□□□□ -0.74
GRAMD1A-209	ENST00000598580	CSNK1G2	P78368	415 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms