RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 HSD17B2P37059 387 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 TBPL1P62380 186 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 KLC1Q07866 573 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 MYBPC3Q14896 1274 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 FASTKD3Q14CZ7 662 aaKnown RBP13.1□□□□□ -0.31
SCAF1-203ENST00000598359 MORF4L2Q15014 288 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 RBBP7Q16576 425 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 PHKG1Q16816 387 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 VWA2Q5GFL6 755 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 TEDDM1Q5T9Z0 273 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 VWA5B1Q5TIE3 1220 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 KIRREL2Q6UWL6 708 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 CNTN4Q8IWV2 1026 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
SCAF1-203ENST00000598359 SHISA5Q8N114 240 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 PDIK1LQ8N165 341 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 AMER2Q8N7J2 671 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 GPATCH11Q8N954 259 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 STT3BQ8TCJ2 826 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 C8orf44Q96CB5 159 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 OLFM1Q99784 485 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 MACROD1Q9BQ69 325 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 NAT9Q9BTE0 207 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 CRB3Q9BUF7 120 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 YIPF2Q9BWQ6 316 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 ATG10Q9H0Y0 220 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 ZNF552Q9H707 407 aaPredicted RBP13.1□□□□□ -0.31
SCAF1-203ENST00000598359 TAS2R13Q9NYV9 303 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 MAP10Q9P2G4 905 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 MRPS2Q9Y399 296 aaKnown RBP13.1□□□□□ -0.31
SCAF1-203ENST00000598359 TEX264Q9Y6I9 313 aa13.1□□□□□ -0.31
SCAF1-203ENST00000598359 PRRC2CQ9Y520 2896 aaKnown RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 A0A0A6YYC8 382 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 I3L1I5 382 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 TSPAN12O95859 305 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 ZGLP1P0C6A0 271 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 EZRP15311 586 aaKnown RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 GNLYP22749 145 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 ITGA3P26006 1051 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 RPL21P46778 160 aaKnown RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 RGS4P49798 205 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 CBX1P83916 185 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 NAA25Q14CX7 972 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 HIF1AQ16665 826 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 MUM1Q2TAK8 710 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 PLEKHN1Q494U1 663 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 HECTD2Q5U5R9 776 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 PRAMEF13Q5VWM6 474 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 STEAP4Q687X5 459 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 PARP9Q8IXQ6 854 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 MYO1HQ8N1T3 1032 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 ARHGEF39Q8N4T4 335 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 MCOLN3Q8TDD5 553 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 RERGQ96A58 199 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 MIEF2Q96C03 454 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 SNF8Q96H20 258 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 RAB17Q9H0T7 212 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 MED4Q9NPJ6 270 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 ATP13A2Q9NQ11 1180 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 CCDC177Q9NQR7 707 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 ZNF282Q9UDV7 671 aaPredicted RBP13.09□□□□□ -0.31
SCAF1-203ENST00000598359 IKZF3Q9UKT9 509 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 PSAT1Q9Y617 370 aa13.09□□□□□ -0.31
SCAF1-203ENST00000598359 FEZF1A0PJY2 475 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 EIF3FO00303 357 aaPredicted RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 FOXS1O43638 330 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PIAS1O75925 651 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 IGHEP01854 428 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 SAT1P21673 171 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 ARL4CP56559 192 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 ABATP80404 500 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 OCA2Q04671 838 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 Q0VFX4 171 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PDIA2Q13087 525 aaKnown RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 AIMP2Q13155 320 aaKnown RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PDAP1Q13442 181 aaKnown RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 NAE1Q13564 534 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 INPP5JQ15735 1006 aaPredicted RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 ZXDCQ2QGD7 858 aaPredicted RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 DUPD1Q68J44 220 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 FAAH2Q6GMR7 532 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PRMT9Q6P2P2 845 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 AGTRAPQ6RW13 159 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 KIAA0408Q6ZU52 694 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PRSS41Q7RTY9 318 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 VN1R4Q7Z5H5 301 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 ATCAYQ86WG3 371 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 EFCAB3Q8N7B9 438 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 AMER3Q8N944 861 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms