RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 FAM129AQ9BZQ8 928 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 LRRC4CQ9HCJ2 640 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 ZDHHC18Q9NUE0 388 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 P4HTMQ9NXG6 502 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 ARL15Q9NXU5 204 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 CTSFQ9UBX1 484 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 SH2B3Q9UQQ2 575 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
USE1-207ENST00000596136 DOCK10Q96BY6 2186 aa12.43□□□□□ -0.42
USE1-207ENST00000596136 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
USE1-207ENST00000596136 AGPSO00116 658 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 CDC7O00311 574 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 PEX12O00623 359 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 SOCS6O14544 535 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 P2RX6O15547 441 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 FOXS1O43638 330 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 PIAS1O75925 651 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
USE1-207ENST00000596136 GP5P40197 560 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 MAGEA4P43358 317 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 DSG2Q14126 1118 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 ZNF460Q14592 562 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 CAPN12Q6ZSI9 719 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 ADCK2Q7Z695 626 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 HPS6Q86YV9 775 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 PLD3Q8IV08 490 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 MMGT1Q8N4V1 131 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 FDCSPQ8NFU4 85 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 STT3BQ8TCJ2 826 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 ANKRD49Q8WVL7 239 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 CABS1Q96KC9 395 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 GPR22Q99680 433 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 RBBP8Q99708 897 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 SMAD5Q99717 465 aaKnown RBP12.42□□□□□ -0.42
USE1-207ENST00000596136 TGIF2Q9GZN2 237 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 DERL2Q9GZP9 239 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 SEMA3GQ9NS98 782 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 ABCF3Q9NUQ8 709 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 ZNF282Q9UDV7 671 aaPredicted RBP12.42□□□□□ -0.42
USE1-207ENST00000596136 MAU2Q9Y6X3 613 aa12.42□□□□□ -0.42
USE1-207ENST00000596136 PRRC2CQ9Y520 2896 aaKnown RBP12.42□□□□□ -0.42
USE1-207ENST00000596136 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.42
USE1-207ENST00000596136 LCMT2O60294 686 aaKnown RBP12.41□□□□□ -0.42
USE1-207ENST00000596136 ZGLP1P0C6A0 271 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 SAT1P21673 171 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 PGDP52209 483 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 SLC7A5Q01650 507 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 ZKSCAN8Q15776 578 aaPredicted RBP12.41□□□□□ -0.42
USE1-207ENST00000596136 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 KIRREL2Q6UWL6 708 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 CNTRLQ7Z7A1 2325 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 ADAMTSL2Q86TH1 951 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 KLHDC8AQ8IYD2 350 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 METTL27Q8N6F8 245 aaPredicted RBP12.41□□□□□ -0.42
USE1-207ENST00000596136 AMER3Q8N944 861 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 COL26A1Q96A83 441 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 PYCR2Q96C36 320 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 UBXN10Q96LJ8 280 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 NUDT9Q9BW91 350 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 DRC3Q9H069 523 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 EPN3Q9H201 632 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 GPAMQ9HCL2 828 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 C5AR2Q9P296 337 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 ZNF451Q9Y4E5 1061 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 MAP4K5Q9Y4K4 846 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 OARD1Q9Y530 152 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 HS3ST3B1Q9Y662 390 aa12.41□□□□□ -0.42
USE1-207ENST00000596136 A0A1W2PQ72 361 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 ESYT3A0FGR9 886 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 PABPN1LA6NDY0 278 aaKnown RBP12.4□□□□□ -0.42
USE1-207ENST00000596136 H0YIG0 161 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 WISP1O95388 367 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 GUCA1CO95843 209 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 ANXA5P08758 320 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 CDH1P12830 882 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 FBLP22087 321 aaKnown RBP12.4□□□□□ -0.42
USE1-207ENST00000596136 SPRP35270 261 aaPredicted RBP12.4□□□□□ -0.42
USE1-207ENST00000596136 BCL6P41182 706 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 HNMTP50135 292 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 CSRP3P50461 194 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 CCR8P51685 355 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 SNRPNP63162 240 aaKnown RBP12.4□□□□□ -0.42
USE1-207ENST00000596136 OCA2Q04671 838 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 TLE1Q04724 770 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 KLC1Q07866 573 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 NAB1Q13506 487 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 MYBPC3Q14896 1274 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 NDUFA9Q16795 377 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 KBTBD12Q3ZCT8 623 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 CDKL4Q5MAI5 379 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 GRTP1Q5TC63 336 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 ATG9BQ674R7 924 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 TMEM214Q6NUQ4 689 aaKnown RBP12.4□□□□□ -0.42
USE1-207ENST00000596136 RELL1Q8IUW5 271 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 GALNT16Q8N428 558 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 TEX19Q8NA77 164 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 MFSD9Q8NBP5 474 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 CLEC1AQ8NC01 280 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 CAMKVQ8NCB2 501 aa12.4□□□□□ -0.42
USE1-207ENST00000596136 MIEF2Q96C03 454 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms