RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 LCTLQ6UWM7 567 aa20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 LRIG3Q6UXM1 1119 aa20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 THOC6Q86W42 341 aaKnown RBP20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 TSNARE1Q96NA8 513 aa20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 FCRL4Q96PJ5 515 aa20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 PSMG3-AS1Q96PY0 264 aa20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 PDE7BQ9NP56 450 aa20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 SLC39A1Q9NY26 324 aa20.58■□□□□ 0.89
R3HDM4-206ENST00000590454 ZNF891A8MT65 544 aaPredicted RBP20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 H7BY64 318 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 KLK8O60259 260 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 WDR47O94967 919 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 S100BP04271 92 aaPredicted RBP20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 CDH1P12830 882 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 GGT5P36269 586 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 ZNF425Q6IV72 752 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 SRRM1Q8IYB3 904 aaKnown RBP20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 KLHDC8AQ8IYD2 350 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 DNAJC22Q8N4W6 341 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 TCTN2Q96GX1 697 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 PRAP1Q96NZ9 151 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 MRPL57Q9BQC6 102 aaKnown RBP20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 MRPL46Q9H2W6 279 aaKnown RBP20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 KLK4Q9Y5K2 254 aa20.57■□□□□ 0.88
R3HDM4-206ENST00000590454 SPTBP11277 2137 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 CCDC189A1A4V9 331 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 OR2A25A4D2G3 310 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 SYCE1LA8MT33 242 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 TIAF1O95411 115 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 TUBB3Q13509 450 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 PAQR7Q86WK9 346 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 CACNA2D3Q8IZS8 1091 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 TCAIMQ8N3R3 496 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 C9orf43Q8TAL5 461 aaPredicted RBP20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 NEIL2Q969S2 332 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 PLCD4Q9BRC7 762 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 CD244Q9BZW8 370 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 PCBD2Q9H0N5 130 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 FBXO8Q9NRD0 319 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 FGF21Q9NSA1 209 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 B3GALT1Q9Y5Z6 326 aa20.56■□□□□ 0.88
R3HDM4-206ENST00000590454 RGS16O15492 202 aaPredicted RBP20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 CCNT2O60583 730 aaKnown RBP20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 SPAG7O75391 227 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 FKBP9O95302 570 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 SIX3O95343 332 aaPredicted RBP20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 GSTA1P08263 222 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 GFAPP14136 432 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 EPORP19235 508 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 CCND1P24385 295 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 CRHR1P34998 444 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 ABATP80404 500 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 SETDB1Q15047 1291 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 CATSPEREQ5SY80 951 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 TMTC4Q5T4D3 741 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 PRAMEF17Q5VTA0 474 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 FBXO42Q6P3S6 717 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 C17orf64Q86WR6 236 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 PLD3Q8IV08 490 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 CNPY4Q8N129 248 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 BANPQ8N9N5 519 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 OR1L3Q8NH93 324 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 UBTD2Q8WUN7 234 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 ZUFSPQ96AP4 578 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 ZNF501Q96CX3 271 aaPredicted RBP20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 PHF21BQ96EK2 531 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 DDA1Q9BW61 102 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 CENPHQ9H3R5 247 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 ZNF71Q9NQZ8 489 aaPredicted RBP20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 DCDC2Q9UHG0 476 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 PILRAQ9UKJ1 303 aa20.55■□□□□ 0.88
R3HDM4-206ENST00000590454 TMEM150CB9EJG8 249 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 COPEO14579 308 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 HAT1O14929 419 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 POLR1CO15160 346 aaPredicted RBP20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 PRAMEF4O60810 478 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 GLRA3O75311 464 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 STK16O75716 305 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 CCNDBP1O95273 360 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 ALDH18A1P54886 795 aaKnown RBP20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 CSNK1G2P78368 415 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 MEF2AQ02078 507 aaPredicted RBP20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 TNFAIP8L3Q5GJ75 292 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 PRAMEF9Q5VWM5 478 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 FRMPD2BQ6IN97 320 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 ADCK2Q7Z695 626 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 LCA5Q86VQ0 697 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 MCATQ8IVS2 390 aaKnown RBP20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 PTGR2Q8N8N7 351 aaPredicted RBP20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 HAUS8Q9BT25 410 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 ASPSCR1Q9BZE9 553 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 CHRNA10Q9GZZ6 450 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 SPRTNQ9H040 489 aaPredicted RBP20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 SPNS1Q9H2V7 528 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 ACSS2Q9NR19 701 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 DNAJC11Q9NVH1 559 aa20.54■□□□□ 0.88
R3HDM4-206ENST00000590454 UQCRHLA0A096LP55 91 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 LOC105369274A0A096LPK9 316 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 LOC102723532A0A0G2JNH3 316 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 A0A0J9YVX5 310 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms