RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZBTB26Q9HCK0 441 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 FGF21Q9NSA1 209 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 IRAK4Q9NWZ3 460 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 GEMIN8Q9NWZ8 242 aaKnown RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 OCIAD1Q9NX40 245 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 PLCL2Q9UPR0 1127 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 PCM1Q15154 2024 aa13.06□□□□□ -0.32
VMP1-210ENST00000589823 CNOT1A5YKK6 2376 aaKnown RBP13.06□□□□□ -0.32
VMP1-210ENST00000589823 TRBC2A0A5B9 178 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 B4E171 279 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 H3BQF6 201 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 PLD2O14939 933 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 OR1F1O43749 312 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 HYAL3O43820 417 aaPredicted RBP13.05□□□□□ -0.32
VMP1-210ENST00000589823 NRP2O60462 931 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 PRAMEF4O60810 478 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 CTSVO60911 334 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 WFS1O76024 890 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 MSL3P1P0C860 447 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 FGF3P11487 239 aaPredicted RBP13.05□□□□□ -0.32
VMP1-210ENST00000589823 CHN1P15882 459 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 GRK2P25098 689 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 TSPAN7P41732 249 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 PKNOX1P55347 436 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 SH3BP2P78314 561 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 CYP4F3Q08477 520 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 RCN2Q14257 317 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 GPR19Q15760 415 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 DEFB110Q30KQ9 67 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 PRAMEF9Q5VWM5 478 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 FBXO42Q6P3S6 717 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 FOXR1Q6PIV2 292 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 GPRIN3Q6ZVF9 776 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 PLD3Q8IV08 490 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
VMP1-210ENST00000589823 L3MBTL4Q8NA19 623 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 TTLQ8NG68 377 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 OR4F6Q8NGB9 312 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 OR52B6Q8NGF0 335 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 RERGQ96A58 199 aaPredicted RBP13.05□□□□□ -0.32
VMP1-210ENST00000589823 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 FCRL4Q96PJ5 515 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 OR6C1Q96RD1 312 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 ZNF382Q96SR6 550 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 NT5DC2Q9H857 520 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 EML4Q9HC35 981 aaKnown RBP13.05□□□□□ -0.32
VMP1-210ENST00000589823 MID1IP1Q9NPA3 183 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 SIDT1Q9NXL6 827 aaKnown RBP13.05□□□□□ -0.32
VMP1-210ENST00000589823 SERTAD3Q9UJW9 196 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 PILRAQ9UKJ1 303 aa13.05□□□□□ -0.32
VMP1-210ENST00000589823 COL27A1Q8IZC6 1860 aaPredicted RBP13.05□□□□□ -0.32
VMP1-210ENST00000589823 TMEM150CB9EJG8 249 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 POLR1CO15160 346 aaPredicted RBP13.04□□□□□ -0.32
VMP1-210ENST00000589823 SRPX2O60687 465 aaPredicted RBP13.04□□□□□ -0.32
VMP1-210ENST00000589823 CRCPO75575 148 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 CCL4P13236 92 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 BGNP21810 368 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 BCL6P41182 706 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 RAB15P59190 212 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 MC2RQ01718 297 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 TRAF3Q13114 568 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 STX3Q13277 289 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 E2F2Q14209 437 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 IL11RAQ14626 422 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 C3orf38Q5JPI3 329 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 ATG16L1Q676U5 607 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 TTC19Q6DKK2 380 aaPredicted RBP13.04□□□□□ -0.32
VMP1-210ENST00000589823 MED27Q6P2C8 311 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 TMIGD1Q6UXZ0 262 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 BPHLQ86WA6 291 aaPredicted RBP13.04□□□□□ -0.32
VMP1-210ENST00000589823 GPR135Q8IZ08 494 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 ZNF655Q8N720 491 aaPredicted RBP13.04□□□□□ -0.32
VMP1-210ENST00000589823 MFSD9Q8NBP5 474 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 ZNF740Q8NDX6 193 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 OR8K5Q8NH50 307 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 RAB3IL1Q8TBN0 382 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 REPS1Q96D71 796 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 CDK15Q96Q40 435 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 SARGQ9BW04 601 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 NLNQ9BYT8 704 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 SLC39A1Q9NY26 324 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 PISDQ9UG56 409 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 TRPS1Q9UHF7 1281 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 RARRES3Q9UL19 164 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 RNF11Q9Y3C5 154 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 PCDHGA11Q9Y5H2 935 aa13.04□□□□□ -0.32
VMP1-210ENST00000589823 SPEGQ15772 3267 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 KCNE1BA0A087WTH5 132 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ANKDD1BA6NHY2 528 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 TMEM114B3SHH9 223 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 H0YGG7 62 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 PPP6CO00743 305 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 LCMT2O60294 686 aaKnown RBP13.03□□□□□ -0.32
VMP1-210ENST00000589823 OR4F21O95013 312 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 ESRRBO95718 433 aa13.03□□□□□ -0.32
VMP1-210ENST00000589823 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
VMP1-210ENST00000589823 PCNAP12004 261 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms