RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LRRC56Q8IYG6 542 aaPredicted RBP13.66□□□□□ -0.22
MBD1-220ENST00000589758 KIF18AQ8NI77 898 aa13.66□□□□□ -0.22
MBD1-220ENST00000589758 DNAJB14Q8TBM8 379 aa13.66□□□□□ -0.22
MBD1-220ENST00000589758 CD200R1Q8TD46 325 aa13.66□□□□□ -0.22
MBD1-220ENST00000589758 MMABQ96EY8 250 aaPredicted RBP13.66□□□□□ -0.22
MBD1-220ENST00000589758 LMF1Q96S06 567 aa13.66□□□□□ -0.22
MBD1-220ENST00000589758 BARD1Q99728 777 aaKnown RBP13.66□□□□□ -0.22
MBD1-220ENST00000589758 TGIF2Q9GZN2 237 aa13.66□□□□□ -0.22
MBD1-220ENST00000589758 MKKSQ9NPJ1 570 aaPredicted RBP13.66□□□□□ -0.22
MBD1-220ENST00000589758 TRPC4Q9UBN4 977 aa13.66□□□□□ -0.22
MBD1-220ENST00000589758 PLEKHB1Q9UF11 243 aaPredicted RBP13.66□□□□□ -0.22
MBD1-220ENST00000589758 TRMT6Q9UJA5 497 aaKnown RBP13.66□□□□□ -0.22
MBD1-220ENST00000589758 NSG1A0A0A6YYJ2 146 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 ANKUB1A6NFN9 424 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 TTC4O95801 387 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 FDXRP22570 491 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 TSFMP43897 325 aaKnown RBP13.65□□□□□ -0.22
MBD1-220ENST00000589758 MPP1Q00013 466 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 MFAP5Q13361 173 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 TLR1Q15399 786 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 HIF1AQ16665 826 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 HKDC1Q2TB90 917 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 C4orf17Q53FE4 359 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 ZNF572Q7Z3I7 529 aaPredicted RBP13.65□□□□□ -0.22
MBD1-220ENST00000589758 PALM2Q8IXS6 379 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 PRSS58Q8IYP2 241 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 PDIK1LQ8N165 341 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 MCOLN3Q8TDD5 553 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 CFAP36Q96G28 342 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 CCDC138Q96M89 665 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 ERP44Q9BS26 406 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 NAT9Q9BTE0 207 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 DRC3Q9H069 523 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 PCBD2Q9H0N5 130 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 ZNF160Q9HCG1 818 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 CCDC177Q9NQR7 707 aaPredicted RBP13.65□□□□□ -0.22
MBD1-220ENST00000589758 IARS2Q9NSE4 1012 aaKnown RBP13.65□□□□□ -0.22
MBD1-220ENST00000589758 ABCF3Q9NUQ8 709 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 TMEM184CQ9NVA4 438 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 NOVA2Q9UNW9 492 aaKnown RBP13.65□□□□□ -0.22
MBD1-220ENST00000589758 FLNCQ14315 2725 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 DOCK10Q96BY6 2186 aa13.65□□□□□ -0.22
MBD1-220ENST00000589758 HEATR5BQ9P2D3 2071 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 KCNE1BA0A087WTH5 132 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 A0A1W2PQ72 361 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 IDSB3KWA1 339 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 H7BY64 318 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 C8GP07360 202 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 HEXBP07686 556 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 F7P08709 466 aaPredicted RBP13.64□□□□□ -0.23
MBD1-220ENST00000589758 IMPA1P29218 277 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 AVPR1BP47901 424 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 ARL4CP56559 192 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 RPS15AP62244 130 aaKnown RBP13.64□□□□□ -0.23
MBD1-220ENST00000589758 AP2B1P63010 937 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 SLC7A5Q01650 507 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 Q0VFX4 171 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 CALCOCO2Q13137 446 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 SP140Q13342 867 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 CRYMQ14894 314 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 ZNF169Q14929 603 aaPredicted RBP13.64□□□□□ -0.23
MBD1-220ENST00000589758 SPANXN3Q5MJ09 141 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 PIWIL4Q7Z3Z4 852 aaKnown RBP13.64□□□□□ -0.23
MBD1-220ENST00000589758 LAPTM4BQ86VI4 370 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 ANKMY2Q8IV38 441 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 IGDCC3Q8IVU1 814 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 C2CD4AQ8NCU7 369 aaPredicted RBP13.64□□□□□ -0.23
MBD1-220ENST00000589758 BBOF1Q8ND07 529 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 C8orf44Q96CB5 159 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 THAP11Q96EK4 314 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 PRAP1Q96NZ9 151 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 SYNPO2LQ9H987 977 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 TAS2R13Q9NYV9 303 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 CHMP2BQ9UQN3 213 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 UTP11Q9Y3A2 253 aaKnown RBP13.64□□□□□ -0.23
MBD1-220ENST00000589758 CSAG2Q9Y5P2 127 aa13.64□□□□□ -0.23
MBD1-220ENST00000589758 MDC1Q14676 2089 aaKnown RBP13.63□□□□□ -0.23
MBD1-220ENST00000589758 A0A0A6YYC8 382 aaPredicted RBP13.63□□□□□ -0.23
MBD1-220ENST00000589758 H0YIG0 161 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 I3L1I5 382 aaPredicted RBP13.63□□□□□ -0.23
MBD1-220ENST00000589758 HAT1O14929 419 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 SLC16A5O15375 505 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 FOXS1O43638 330 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 COX6A1P12074 109 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 ICAM2P13598 275 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 CCND1P24385 295 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 ELK3P41970 407 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 CDC16Q13042 620 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 PDIA2Q13087 525 aaKnown RBP13.63□□□□□ -0.23
MBD1-220ENST00000589758 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 C8orf74Q6P047 294 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 RPUSD3Q6P087 351 aaKnown RBP13.63□□□□□ -0.23
MBD1-220ENST00000589758 LINC00696Q6ZRV3 163 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 ARHGEF39Q8N4T4 335 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 AMER3Q8N944 861 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
MBD1-220ENST00000589758 EEF1AKMT1Q8WVE0 214 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms