RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PLCL2Q9UPR0 1127 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 TSC22D4Q9Y3Q8 395 aa11.67□□□□□ -0.54
DNMT1-218ENST00000589294 CCDC187A0A096LP49 1063 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 TMEM114B3SHH9 223 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 H0YIV9 168 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 PRAMEF10O60809 474 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 CTSVO60911 334 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 ESRRBO95718 433 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 FOLR1P15328 257 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 CHN1P15882 459 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 VARSP26640 1264 aaKnown RBP11.66□□□□□ -0.54
DNMT1-218ENST00000589294 GSTM2P28161 218 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 AHRP35869 848 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-218ENST00000589294 ERVPABLB-1P60509 514 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 REEP5Q00765 189 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 MC2RQ01718 297 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 STX3Q13277 289 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 RCN2Q14257 317 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 CHI3L2Q15782 390 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 RBBP7Q16576 425 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 GGTA1PQ4G0N0 100 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 MANEAQ5SRI9 462 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 C10orf62Q5T681 223 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-218ENST00000589294 ATG16L1Q676U5 607 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 GRHL2Q6ISB3 625 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 TMIGD1Q6UXZ0 262 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 GPRIN3Q6ZVF9 776 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 RNF44Q7L0R7 432 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 RAB11FIP2Q7L804 512 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 CHCHD4Q8N4Q1 142 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 MFSD9Q8NBP5 474 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 TTLQ8NG68 377 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 OR52B6Q8NGF0 335 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 WDR36Q8NI36 951 aaKnown RBP11.66□□□□□ -0.54
DNMT1-218ENST00000589294 REPS1Q96D71 796 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 MOCOSQ96EN8 888 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 OR2A5Q96R48 311 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 RHBGQ9H310 441 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 MANSC1Q9H8J5 431 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 FANCEQ9HB96 536 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 ADGRE2Q9UHX3 823 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 ZNF490Q9ULM2 529 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-218ENST00000589294 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-218ENST00000589294 PCDHGA11Q9Y5H2 935 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 AP1M2Q9Y6Q5 423 aa11.66□□□□□ -0.54
DNMT1-218ENST00000589294 PPP6CO00743 305 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 TXNDC9O14530 226 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 UBFD1O14562 309 aaKnown RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 KLF11O14901 512 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 HAT1O14929 419 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 OR1F1O43749 312 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 LCMT2O60294 686 aaKnown RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ENO1P06733 434 aaKnown RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 FGF4P08620 206 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 TSPAN8P19075 237 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 SERPINB1P30740 379 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 SCTRP47872 440 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 GABRA4P48169 554 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 SH3BP2P78314 561 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 TRAF3Q13114 568 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 SLBPQ14493 270 aaKnown RBP eCLIP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ARL13AQ5H913 290 aaPredicted RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 TCTE1Q5JU00 501 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 MED27Q6P2C8 311 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 RPS27LQ71UM5 84 aaKnown RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 LAS2Q8IYD9 372 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 BMPERQ8N8U9 685 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ZNF740Q8NDX6 193 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 TRPV3Q8NET8 790 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 OR4F6Q8NGB9 312 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 DYDC1Q8WWB3 177 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 N4BP2L2Q92802 583 aaPredicted RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 RERGQ96A58 199 aaPredicted RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ZNF501Q96CX3 271 aaPredicted RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ZNF285Q96NJ3 590 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 FCRL4Q96PJ5 515 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ZPBPQ9BS86 351 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 B3GNT4Q9C0J1 378 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 MID1IP1Q9NPA3 183 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ACSS2Q9NR19 701 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 FGF21Q9NSA1 209 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 SIDT1Q9NXL6 827 aaKnown RBP11.65□□□□□ -0.54
DNMT1-218ENST00000589294 PSD3Q9NYI0 1048 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 TRPS1Q9UHF7 1281 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 ZFP69BQ9UJL9 534 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 RNF11Q9Y3C5 154 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 LOXL2Q9Y4K0 774 aa11.65□□□□□ -0.54
DNMT1-218ENST00000589294 SPEGQ15772 3267 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 A0A0J9YVX5 310 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 FEZF1A0PJY2 475 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 EFCAB7A8K855 629 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 H0YGG7 62 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 PLD2O14939 933 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 FGF5P12034 268 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 HGFP14210 728 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 CD22P20273 847 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 BGNP21810 368 aa11.64□□□□□ -0.55
DNMT1-218ENST00000589294 ARL1P40616 181 aaPredicted RBP11.64□□□□□ -0.55
DNMT1-218ENST00000589294 PIK3CBP42338 1070 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms