RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ZFP36L1Q07352 338 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 CATSPEREQ5SY80 951 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 CDCP2Q5VXM1 449 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 LETMD1Q6P1Q0 360 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 TMIGD1Q6UXZ0 262 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 RNF44Q7L0R7 432 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 ARHGAP22Q7Z5H3 698 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 SYVN1Q86TM6 617 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 ZNF655Q8N720 491 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 CCDC74BQ96LY2 380 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 CCT7Q99832 543 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 KLHL3Q9UH77 587 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 SH2B3Q9UQQ2 575 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 SNRNP200O75643 2136 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 IGHV5-51A0A0C4DH38 117 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 SLCO1B7G3V0H7 640 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 TXNDC9O14530 226 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 SRPX2O60687 465 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 CHRNGP07510 517 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 TSPAN8P19075 237 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 VARSP26640 1264 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 HMOX2P30519 316 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 CSTF2P33240 577 aaKnown RBP eCLIP16.27■□□□□ 0.26e-8■□□□□ 9.6
SCAMP4-211ENST00000588907 PLA2G5P39877 138 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 LSSP48449 732 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 ERVPABLB-1P60509 514 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 OCRLQ01968 901 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 GUCY1A3Q02108 690 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 IFT88Q13099 833 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 EIF3IQ13347 325 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 RSPO4Q2I0M5 234 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 CCDC157Q569K6 752 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 SNAP47Q5SQN1 464 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 PHF19Q5T6S3 580 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 TTC19Q6DKK2 380 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 FCRL6Q6DN72 434 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 ZNF574Q6ZN55 896 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 RNF165Q6ZSG1 346 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 RPS27LQ71UM5 84 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 BPHLQ86WA6 291 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 CRLF3Q8IUI8 442 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 LAS2Q8IYD9 372 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 CLYBLQ8N0X4 340 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 LSMEM2Q8N112 164 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 D2HGDHQ8N465 521 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 AGBL5Q8NDL9 886 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 TRPV3Q8NET8 790 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 METTL6Q8TCB7 284 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 RERGQ96A58 199 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 ELOVL6Q9H5J4 265 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 TMEM9Q9P0T7 183 aa16.27■□□□□ 0.2
SCAMP4-211ENST00000588907 UBFD1O14562 309 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 AZIN1O14977 448 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 KIF1CO43896 1103 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 OR4F21O95013 312 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 CAPN1P07384 714 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 PVRP15151 417 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 PIK3CBP42338 1070 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 SCTRP47872 440 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 RPL14P50914 215 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 ACY1Q03154 408 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 CPSF6Q16630 551 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 TCTE1Q5JU00 501 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 SH2D4BQ5SQS7 431 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 MANEAQ5SRI9 462 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 FRG2Q64ET8 278 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 TMPRSS9Q7Z410 1059 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 FAM20CQ8IXL6 584 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 CDYL2Q8N8U2 506 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 MFSD9Q8NBP5 474 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 OR8K5Q8NH50 307 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 N4BP2L2Q92802 583 aaPredicted RBP16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 CDK15Q96Q40 435 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 FRG2BQ96QU4 278 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 CMKLR1Q99788 373 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 NLNQ9BYT8 704 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 RHBGQ9H310 441 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 ZFP69BQ9UJL9 534 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 PILRAQ9UKJ1 303 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 PPT2Q9UMR5 302 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 PLCL2Q9UPR0 1127 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 CLCA2Q9UQC9 943 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 RNF11Q9Y3C5 154 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 PCDHGA4Q9Y5G9 962 aa16.26■□□□□ 0.19
SCAMP4-211ENST00000588907 ANKDD1BA6NHY2 528 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 HAT1O14929 419 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 ITM2AO43736 263 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 OR1F1O43749 312 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 PRAMEF4O60810 478 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 ULK1O75385 1050 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 KCNK5O95279 499 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 MT-CO3P00414 261 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 SLC35G6P0C7Q6 338 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 HSD3B1P14060 373 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 CD22P20273 847 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 HSD3B2P26439 372 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 PWP1Q13610 501 aa16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 RBBP5Q15291 538 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 ZRSR2Q15696 482 aaKnown RBP16.25■□□□□ 0.19
SCAMP4-211ENST00000588907 PRAMEF9Q5VWM5 478 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms