RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KLC3Q6P597 504 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 SNRNP27Q8WVK2 155 aaKnown RBP19.3■□□□□ 0.68
DDX39A-207ENST00000588542 MR1Q95460 341 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 GBP5Q96PP8 586 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 RUFY1Q96T51 708 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 NDC1Q9BTX1 674 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 SLC7A5P2Q9GIP4 190 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 SPNS1Q9H2V7 528 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 GPN2Q9H9Y4 310 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-207ENST00000588542 DYRK1BQ9Y463 629 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 PCDHGA4Q9Y5G9 962 aa19.3■□□□□ 0.68
DDX39A-207ENST00000588542 SYCE1LA8MT33 242 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 MAP2K7O14733 419 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 P2RX6O15547 441 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 STK16O75716 305 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 IPO13O94829 963 aaKnown RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 S100BP04271 92 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 KLK3P07288 261 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 BCL6P41182 706 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 AGTR2P50052 363 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 ARSFP54793 590 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 RPS15AP62244 130 aaKnown RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 CXADRP78310 365 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 MEF2AQ02078 507 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 DNASE1L3Q13609 305 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 HKDC1Q2TB90 917 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 C1orf189Q5VU69 101 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 VN1R4Q7Z5H5 301 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 ARHGEF39Q8N4T4 335 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 ZNF740Q8NDX6 193 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 OR2W6PQ8NHA6 318 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 EPS8L3Q8TE67 593 aaKnown RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 UBTD2Q8WUN7 234 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 KIAA1143Q96AT1 154 aaPredicted RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 SLC45A3Q96JT2 553 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 CABS1Q96KC9 395 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 SARGQ9BW04 601 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 CD244Q9BZW8 370 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 CNOT10Q9H9A5 744 aaKnown RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 PPCSQ9HAB8 311 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 PELI2Q9HAT8 420 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 CUTCQ9NTM9 273 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 PCDHGA6Q9Y5G7 932 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 MRPS18BQ9Y676 258 aaKnown RBP19.29■□□□□ 0.68
DDX39A-207ENST00000588542 KCNE2Q9Y6J6 123 aa19.29■□□□□ 0.68
DDX39A-207ENST00000588542 HYKKA2RU49 373 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 FOXO6A8MYZ6 492 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 C21orf140B9A014 251 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 DSCR3O14972 297 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 KLK8O60259 260 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 NUDT17P0C025 328 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 ITGAXP20702 1163 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 SLCO1A2P46721 670 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 CDC16Q13042 620 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 RASA2Q15283 850 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 TSNAXIP1Q2TAA8 658 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 ARHGAP40Q5TG30 622 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 YOD1Q5VVQ6 348 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-207ENST00000588542 NXPE4Q6UWF7 544 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 FAM198BQ6UWH4 519 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 TTLL10Q6ZVT0 673 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 TMPRSS11BQ86T26 416 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 CYP4X1Q8N118 509 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 DTWD1Q8N5C7 304 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 CSNK1A1LQ8N752 337 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 TTC29Q8NA56 475 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-207ENST00000588542 PROKR1Q8TCW9 393 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 TM4SF19Q96DZ7 209 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 THAP11Q96EK4 314 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 C10orf90Q96M02 699 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 DPH2Q9BQC3 489 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-207ENST00000588542 EFHD1Q9BUP0 239 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 TXLNGQ9NUQ3 528 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 DNAJC11Q9NVH1 559 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 RUVBL1Q9Y265 456 aaKnown RBP19.28■□□□□ 0.68
DDX39A-207ENST00000588542 SCN3AQ9NY46 2000 aa19.28■□□□□ 0.68
DDX39A-207ENST00000588542 ATMQ13315 3056 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 A0A1B0GX78 115 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 A0A1W2PPM1 405 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 PRAMEF4O60810 478 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 STATHP02808 62 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 RBP1P09455 135 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 SBK3P0C264 359 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 GNAZP19086 355 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 EPORP19235 508 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 EMP3P54852 163 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 SNRPNP63162 240 aaKnown RBP19.27■□□□□ 0.68
DDX39A-207ENST00000588542 REEP5Q00765 189 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 FAM214AQ32MH5 1076 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 PRAMEF9Q5VWM5 478 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 SLCO4C1Q6ZQN7 724 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 CNPY4Q8N129 248 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 TMEM151AQ8N4L1 468 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 MREGQ8N565 214 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 RERGQ96A58 199 aaPredicted RBP19.27■□□□□ 0.68
DDX39A-207ENST00000588542 SLC22A11Q9NSA0 550 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 GPRC5BQ9NZH0 403 aa19.27■□□□□ 0.68
DDX39A-207ENST00000588542 TRBC2A0A5B9 178 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 SMIM23A6NLE4 172 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 GOLGA8RI6L899 631 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms