RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ORAI3Q9BRQ5 295 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 SLAMF8Q9P0V8 285 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 ZNF624Q9P2J8 865 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-204ENST00000587339 ABCD2Q9UBJ2 740 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 PCDHB11Q9Y5F2 797 aa19.1■□□□□ 0.65
TRIM47-204ENST00000587339 C19orf67A6NJJ6 358 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 H7BY64 318 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 TGFB1P01137 390 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 PRDX1Q06830 199 aaKnown RBP19.09■□□□□ 0.65
TRIM47-204ENST00000587339 CAMKK1Q8N5S9 505 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 OR2A1Q8NGT9 310 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 DNAJB14Q8TBM8 379 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 FAM174AQ8TBP5 190 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 SLC26A7Q8TE54 656 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 CHTF18Q8WVB6 975 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 CXorf40BQ96DE9 158 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 ASB9Q96DX5 294 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 KLHDC7BQ96G42 594 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 SLC6A18Q96N87 628 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 PRAP1Q96NZ9 151 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 GPR27Q9NS67 375 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 SUCOQ9UBS9 1254 aaKnown RBP19.09■□□□□ 0.65
TRIM47-204ENST00000587339 CD300AQ9UGN4 299 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 BCAP29Q9UHQ4 241 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 SLCO1B1Q9Y6L6 691 aa19.09■□□□□ 0.65
TRIM47-204ENST00000587339 A6NCN8 305 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 FKBP6O75344 327 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 MS4A2Q01362 244 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 MTAPQ13126 283 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 TRIM25Q14258 630 aaKnown RBP19.08■□□□□ 0.65
TRIM47-204ENST00000587339 FZD2Q14332 565 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 SF1Q15637 639 aaKnown RBP19.08■□□□□ 0.65
TRIM47-204ENST00000587339 MAPKAPK3Q16644 382 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 DHDDSQ86SQ9 333 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 SLC15A3Q8IY34 581 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 DEFB119Q8N690 84 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 GPR156Q8NFN8 814 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 TESCQ96BS2 214 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 INVSQ9Y283 1065 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 COL6A3P12111 3177 aa19.08■□□□□ 0.65
TRIM47-204ENST00000587339 METTL12A8MUP2 240 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 NME4O00746 187 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 LRATO95237 230 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 PRPS1L1P21108 318 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 SHMT2P34897 504 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 AP2B1P63010 937 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 EIF2B5Q13144 721 aaKnown RBP19.08■□□□□ 0.64
TRIM47-204ENST00000587339 ZNF542PQ5EBM4 170 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 RIMKLAQ8IXN7 391 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 OR4K1Q8NGD4 311 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 GPBAR1Q8TDU6 330 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 LCN9Q8WX39 176 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 GFM2Q969S9 779 aaKnown RBP19.08■□□□□ 0.64
TRIM47-204ENST00000587339 OR52E6Q96RD3 313 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 OR51B5Q9H339 312 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 ADGRE2Q9UHX3 823 aa19.08■□□□□ 0.64
TRIM47-204ENST00000587339 TRBV23OR9-2A0A075B6M9 112 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 ANKDD1BA6NHY2 528 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 MAP3K7O43318 606 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 ANXA4P09525 319 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-204ENST00000587339 CD27P26842 260 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 SLC19A1P41440 591 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 RPS9P46781 194 aaKnown RBP19.07■□□□□ 0.64
TRIM47-204ENST00000587339 AAGABQ6PD74 315 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 DLEU7Q6UYE1 221 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 AMIGO1Q86WK6 493 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.07■□□□□ 0.642e-9■■■■□ 25.8
TRIM47-204ENST00000587339 KIAA2013Q8IYS2 634 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 CADM4Q8NFZ8 388 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 TMEM74Q96NL1 305 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 GSDMCQ9BYG8 508 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 PITHD1Q9GZP4 211 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-204ENST00000587339 TCEAL2Q9H3H9 227 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-204ENST00000587339 CAAP1Q9H8G2 361 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 OR6C2Q9NZP2 312 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 STX18Q9P2W9 335 aaKnown RBP19.07■□□□□ 0.64
TRIM47-204ENST00000587339 KLF15Q9UIH9 416 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 PPT2Q9UMR5 302 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 SIT1Q9Y3P8 196 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 PCDHA9Q9Y5H5 950 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 PCM1Q15154 2024 aa19.07■□□□□ 0.64
TRIM47-204ENST00000587339 ACOT8O14734 319 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PRMT3O60678 531 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 BCAS2O75934 225 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 KCNH1O95259 989 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PTX3P26022 381 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 S100A3P33764 101 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 ATXN3P54252 364 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 RAE1P78406 368 aaKnown RBP19.06■□□□□ 0.64
TRIM47-204ENST00000587339 REEP5Q00765 189 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PLIN5Q00G26 463 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PWP1Q13610 501 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 RABL3Q5HYI8 236 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 C6orf10Q5SRN2 563 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 NANOGP8Q6NSW7 305 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 GALNT18Q6P9A2 607 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PRR23BQ6ZRT6 265 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 ADCK2Q7Z695 626 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 PARGQ86W56 976 aa19.06■□□□□ 0.64
TRIM47-204ENST00000587339 ANKRD53Q8N9V6 530 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms