RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 VPS50Q96JG6 964 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 NSMCE4AQ9NXX6 385 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 TRPC4Q9UBN4 977 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 PLAAQ9Y263 795 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 ANKRD12Q6UB98 2062 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 A0A0A6YYC8 382 aaPredicted RBP16.83■□□□□ 0.28
TPM4-206ENST00000587201 I3L1I5 382 aaPredicted RBP16.83■□□□□ 0.28
TPM4-206ENST00000587201 FFAR3O14843 346 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 GPR42O15529 346 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 ALOX12BO75342 701 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 GUCA1CO95843 209 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 STATHP02808 62 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 CSNK1G2P78368 415 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 DSG2Q14126 1118 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 TUBB8Q3ZCM7 444 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 DUPD1Q68J44 220 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 KIRREL2Q6UWL6 708 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 ATL1Q8WXF7 558 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 MIB2Q96AX9 1013 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 PYCR2Q96C36 320 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 HAUS8Q9BT25 410 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 SGPP1Q9BX95 441 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 DRC3Q9H069 523 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 ZNF552Q9H707 407 aaPredicted RBP16.83■□□□□ 0.28
TPM4-206ENST00000587201 C3orf18Q9UK00 162 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 SH2B3Q9UQQ2 575 aa16.83■□□□□ 0.28
TPM4-206ENST00000587201 UTP11Q9Y3A2 253 aaKnown RBP16.83■□□□□ 0.28
TPM4-206ENST00000587201 IGLV3-12A0A075B6K2 115 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 EIF3HO15372 352 aaKnown RBP eCLIP16.82■□□□□ 0.28
TPM4-206ENST00000587201 FOXS1O43638 330 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 IPO13O94829 963 aaKnown RBP16.82■□□□□ 0.28
TPM4-206ENST00000587201 ENO2P09104 434 aaPredicted RBP16.82■□□□□ 0.28
TPM4-206ENST00000587201 CDH1P12830 882 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 ZNF37AP17032 561 aaPredicted RBP16.82■□□□□ 0.28
TPM4-206ENST00000587201 GRK3P35626 688 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 AVPR1BP47901 424 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 SOX8P57073 446 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 CBLBQ13191 982 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 FAM53BQ14153 422 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 ZNF460Q14592 562 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 JMJD6Q6NYC1 403 aaPredicted RBP16.82■□□□□ 0.28
TPM4-206ENST00000587201 TMEM207Q6UWW9 146 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 ATCAYQ86WG3 371 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 NKAPQ8N5F7 415 aaKnown RBP16.82■□□□□ 0.28
TPM4-206ENST00000587201 EFCAB3Q8N7B9 438 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 RBMXL3Q8N7X1 1067 aaKnown RBP16.82■□□□□ 0.28
TPM4-206ENST00000587201 CPT1CQ8TCG5 803 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 FBXL8Q96CD0 374 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 THAP11Q96EK4 314 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 PDLIM5Q96HC4 596 aaKnown RBP16.82■□□□□ 0.28
TPM4-206ENST00000587201 VPS39Q96JC1 886 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 SLAMF7Q9NQ25 335 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 LUZP4Q9P127 313 aa16.82■□□□□ 0.28
TPM4-206ENST00000587201 MDC1Q14676 2089 aaKnown RBP16.81■□□□□ 0.28
TPM4-206ENST00000587201 MYO18BQ8IUG5 2567 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 KCNE1BA0A087WTH5 132 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 FEZF1A0PJY2 475 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 MAP2K7O14733 419 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 PIAS1O75925 651 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 SORBS2O94875 1100 aaKnown RBP16.81■□□□□ 0.28
TPM4-206ENST00000587201 NPPBP16860 134 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 SSTR1P30872 391 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 SLC26A3P40879 764 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 TAS2R39P59534 338 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 ZXDCQ2QGD7 858 aaPredicted RBP16.81■□□□□ 0.28
TPM4-206ENST00000587201 IRAK1BP1Q5VVH5 260 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 SLC6A19Q695T7 634 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 VN1R4Q7Z5H5 301 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 LAPTM4BQ86VI4 370 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 PARP9Q8IXQ6 854 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 ARHGEF39Q8N4T4 335 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 AMER3Q8N944 861 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 CAMKVQ8NCB2 501 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 OR11G2Q8NGC1 345 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 OR56A3Q8NH54 315 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 CDKL2Q92772 493 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 MACROD1Q9BQ69 325 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 RHOJQ9H4E5 214 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 MKKSQ9NPJ1 570 aaPredicted RBP16.81■□□□□ 0.28
TPM4-206ENST00000587201 SMYD2Q9NRG4 433 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 C14orf105Q9NVL8 296 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 GRHL1Q9NZI5 618 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 IKZF3Q9UKT9 509 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 NOVA2Q9UNW9 492 aaKnown RBP16.81■□□□□ 0.28
TPM4-206ENST00000587201 MRPS2Q9Y399 296 aaKnown RBP16.81■□□□□ 0.28
TPM4-206ENST00000587201 MAP4K5Q9Y4K4 846 aa16.81■□□□□ 0.28
TPM4-206ENST00000587201 NPEPPSL1A6NEC2 478 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 HEXBP07686 556 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 ACPPP15309 386 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 BCL6P41182 706 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 CCR8P51685 355 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 EMP2P54851 167 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 SLC12A2P55011 1212 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 PLTPP55058 493 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 MAT1AQ00266 395 aaKnown RBP16.8■□□□□ 0.28
TPM4-206ENST00000587201 ILF2Q12905 390 aaKnown RBP16.8■□□□□ 0.28
TPM4-206ENST00000587201 SYT16Q17RD7 645 aa16.8■□□□□ 0.28
TPM4-206ENST00000587201 SBSNQ6UWP8 590 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms