RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	PRAMEF26	H0Y7S4	382 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792		K7ERQ8	282 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	AP3B1	O00203	1094 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	YKT6	O15498	198 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	FLRT2	O43155	660 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SMAD6	O43541	496 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SPOP	O43791	374 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	DFNA5	O60443	496 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	PIAS2	O75928	621 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	TMCC1	O94876	653 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	KCNK5	O95279	499 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	POP4	O95707	220 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CYP1A2	P05177	515 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	UGT2B4	P06133	528 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	ITGA2B	P08514	1039 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CEACAM1	P13688	526 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	ADRB3	P13945	408 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	ERCC2	P18074	760 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CSRP1	P21291	193 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	IL10	P22301	178 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	HNRNPA2B1	P22626	353 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	PAX7	P23759	505 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	PBLD	P30039	288 aa	Predicted RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SLC7A1	P30825	629 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	AKT2	P31751	481 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	HNRNPH3	P31942	346 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	DRD3	P35462	400 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CSNK1E	P49674	416 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	RAD23A	P54725	363 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CDH6	P55285	790 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	RPS21	P63220	83 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	IL10RB	Q08334	325 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	ELP6	Q0PNE2	266 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SEMA3B	Q13214	749 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SGCG	Q13326	291 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	RFTN1	Q14699	578 aa	Predicted RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	MORF4L2	Q15014	288 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	DPYSL2	Q16555	572 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CA9	Q16790	459 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	UGT8	Q16880	541 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SMU1	Q2TAY7	513 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	FLYWCH1	Q4VC44	716 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	RAB6C	Q53S08	254 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	NEK5	Q6P3R8	708 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SLC30A9	Q6PML9	568 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	GDPD4	Q6W3E5	623 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	LEKR1	Q6ZMV7	388 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	DPY19L3	Q6ZPD9	716 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SZRD1	Q7Z422	152 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	TRIM69	Q86WT6	500 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	DNAAF5	Q86Y56	855 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	NAXD	Q8IW45	347 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	UMODL1-AS1	Q8N2C9	162 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	NIPA2	Q8N8Q9	360 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	DEFB124	Q8NES8	71 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CXorf40A	Q8TE69	158 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	FAM216A	Q8WUB2	273 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	TEKT4	Q8WW24	435 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	RAX2	Q96IS3	184 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	CELF6	Q96J87	481 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	PEBP4	Q96S96	227 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	MYOC	Q99972	504 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	RAB6C	Q9H0N0	254 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	MS4A5	Q9H3V2	200 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	GSTO2	Q9H4Y5	243 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	ATP13A3	Q9H7F0	1226 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	LIN28A	Q9H9Z2	209 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	ZMAT3	Q9HA38	289 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SLC35C2	Q9NQQ7	365 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	FSCN3	Q9NQT6	498 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SEPT10	Q9P0V9	454 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SLC23A1	Q9UHI7	598 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	IPO11	Q9UI26	975 aa	Known RBP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	SPAG17	Q6Q759	2223 aa		4.61	□□□□□ -1.67
ZNF540-204	ENST00000586792	PLXNA2	O75051	1894 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	DOCK4	Q8N1I0	1966 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	CACNA1H	O95180	2353 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792		A0A0U1RQK1	487 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	ZNF320	A2RRD8	509 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	CCDC154	A6NI56	674 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	AQP12B	A6NM10	295 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	C16orf96	A6NNT2	1141 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	PTGES3L	E9PB15	166 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792		M0QX08	132 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	PLK4	O00444	970 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	CDX4	O14627	284 aa	Predicted RBP	4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	FPGT	O14772	594 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	VILL	O15195	856 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	SLC31A1	O15431	190 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	RIPK2	O43353	540 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	PRAMEF11	O60813	436 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	ERLIN1	O75477	346 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	ZMPSTE24	O75844	475 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	FAM155B	O75949	473 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	TM7SF2	O76062	418 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	JTB	O76095	146 aa		4.6	□□□□□ -1.67
ZNF540-204	ENST00000586792	PROSC	O94903	275 aa		4.6	□□□□□ -1.67

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