RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PLAGL1Q9UM63 463 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 ICKQ9UPZ9 632 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 TMED5Q9Y3A6 229 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 PCDHGA11Q9Y5H2 935 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 ZFYVE26Q68DK2 2539 aa12.18□□□□□ -0.46
VMP1-202ENST00000585847 IGHV1OR21-1A0A087WYE8 117 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 RHPN2P1A8MT19 583 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 E7ENX8 843 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 NTN3O00634 580 aaPredicted RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 FCHO1O14526 889 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 OR7A17O14581 309 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 ULK1O75385 1050 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 IDO1P14902 403 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 LBPP18428 481 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 CALB2P22676 271 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 PRPH2P23942 346 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 MAPK1P28482 360 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 CD1CP29017 333 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 PKLRP30613 574 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 CSF2RBP32927 897 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 ARL1P40616 181 aaPredicted RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 GPR3P46089 330 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 DUSP3P51452 185 aaPredicted RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 CLDN6P56747 220 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 IRF8Q02556 426 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 TAP2Q03519 686 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 BTKQ06187 659 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 NAE1Q13564 534 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 SQLEQ14534 574 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 PDCD2Q16342 344 aaPredicted RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 HIST2H2ACQ16777 129 aaPredicted RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 GALNTL6Q49A17 601 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 NKAIN2Q5VXU1 208 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 HIST2H2AA3Q6FI13 130 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 CHSY3Q70JA7 882 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 MAVSQ7Z434 540 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 TRIM46Q7Z4K8 759 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 MTDHQ86UE4 582 aaKnown RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 TRIM48Q8IWZ4 208 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 FITM2Q8N6M3 262 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 Q8N9G6 341 aaPredicted RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 TTLQ8NG68 377 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 OR4F6Q8NGB9 312 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 OR2L8Q8NGY9 312 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 TSPEARQ8WU66 669 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 RSC1A1Q92681 617 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 NAT6Q93015 286 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 NSUN5Q96P11 429 aaKnown RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 IL17FQ96PD4 163 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 ELOVL6Q9H5J4 265 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 XKR8Q9H6D3 395 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 ZNF395Q9H8N7 513 aaPredicted RBP12.17□□□□□ -0.46
VMP1-202ENST00000585847 PELI2Q9HAT8 420 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 BRF2Q9HAW0 419 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 ASIC5Q9NY37 505 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 KLK13Q9UKR3 277 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 SLC12A4Q9UP95 1085 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 MAPRE3Q9UPY8 281 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 MSRB2Q9Y3D2 182 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 ENTPD2Q9Y5L3 495 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 CAPN7Q9Y6W3 813 aa12.17□□□□□ -0.46
VMP1-202ENST00000585847 PKD1L2Q7Z442 2459 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 BTN3A3O00478 584 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 SDHDO14521 159 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 PRICKLE3O43900 615 aaPredicted RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 RFPL3O75679 317 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 RSL1D1O76021 490 aaKnown RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 WFS1O76024 890 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 UNC5CO95185 931 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 GP1BAP07359 652 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 CAPN1P07384 714 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 PEBP1P30086 187 aaKnown RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 EPHA4P54764 986 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 ERVPABLB-1P60509 514 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 BNIP1Q12981 228 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 SQSTM1Q13501 440 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 TUBB3Q13509 450 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 ATP6AP1LQ52LC2 224 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 PRAMEF13Q5VWM6 474 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 FRG2Q64ET8 278 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 ATG9BQ674R7 924 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 ZNF574Q6ZN55 896 aaPredicted RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 MBOAT1Q6ZNC8 495 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 DDIASQ8IXT1 998 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 LRRC56Q8IYG6 542 aaPredicted RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 ADGRF3Q8IZF5 1079 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 KRT78Q8N1N4 520 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 LINC01555Q8NAE3 123 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 OR52B6Q8NGF0 335 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 FLVCR1-AS1Q8TAF5 88 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 SLC5A11Q8WWX8 675 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 USP7Q93009 1102 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 SH3KBP1Q96B97 665 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 FRG2BQ96QU4 278 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 SLC38A3Q99624 504 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 LRRN3Q9H3W5 708 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 NT5DC2Q9H857 520 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms