RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SCN3AQ9NY46 2000 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 HEATR5BQ9P2D3 2071 aa13.32□□□□□ -0.28
CSNK1D-224ENST00000584672 USP27XA6NNY8 438 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 HS6ST1O60243 411 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 KLK8O60259 260 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 NME2P1O60361 137 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 VPS26AO75436 327 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 GPC4O75487 556 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 NME2P22392 152 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 CMPK1P30085 196 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 DLX5P56178 289 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 SLC18A3Q16572 532 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 SUSD1Q6UWL2 747 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 CLEC9AQ6UXN8 241 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 CLYBLQ8N0X4 340 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 HORMAD2Q8N7B1 307 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 LRRN4CLQ8ND94 238 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 OR9A4Q8NGU2 314 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 STYXQ8WUJ0 223 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 ASZ1Q8WWH4 475 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 RAD51AP1Q96B01 352 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 C19orf43Q9BQ61 176 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 RBCK1Q9BYM8 510 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 TP63Q9H3D4 680 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 CAPN11Q9UMQ6 739 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 L3MBTL1Q9Y468 752 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 KLK4Q9Y5K2 254 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 CSPG4Q6UVK1 2322 aa13.31□□□□□ -0.28
CSNK1D-224ENST00000584672 NDC80O14777 642 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 C1orf105O95561 183 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 APOA4P06727 396 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 PAPD4Q6PIY7 484 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 PRSS41Q7RTY9 318 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 LDB1Q86U70 411 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 PLD3Q8IV08 490 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 KIF2BQ8N4N8 673 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 RAB42Q8N4Z0 105 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 SLC5A8Q8N695 610 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 OR10Q1Q8NGQ4 319 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 ALPK1Q96QP1 1244 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 OLFM1Q99784 485 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 NAT10Q9H0A0 1025 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 ARNT2Q9HBZ2 717 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 MRPS30Q9NP92 439 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 ABCF3Q9NUQ8 709 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 PCYOX1Q9UHG3 505 aa13.3□□□□□ -0.28
CSNK1D-224ENST00000584672 DNAJC13O75165 2243 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 SMTNL1A8MU46 457 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 PRMT3O60678 531 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 STK10O94804 968 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 GYPCP04921 128 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 TFEBP19484 476 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 TPP2P29144 1249 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 XCR1P46094 333 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 AVPR1BP47901 424 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 ITGA8P53708 1063 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 EMP3P54852 163 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 ACTN3Q08043 901 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 SEMA3AQ14563 771 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 TMED2Q15363 201 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 EXT1Q16394 746 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 SFT2D3Q587I9 215 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 CMPK2Q5EBM0 449 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 EMC4Q5J8M3 183 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 DARS2Q6PI48 645 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 PAQR7Q86WK9 346 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 ZNF227Q86WZ6 799 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 CDKL3Q8IVW4 592 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 ARHGEF39Q8N4T4 335 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 ACRBPQ8NEB7 543 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 OR5M3Q8NGP4 307 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 GSDMBQ8TAX9 411 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 M1APQ8TC57 530 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 NUDT8Q8WV74 236 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 RERGQ96A58 199 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 C18orf12Q96KH6 178 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 SPATA13Q96N96 652 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 PLCD4Q9BRC7 762 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 MMP25Q9NPA2 562 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 SPTLC3Q9NUV7 552 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 FEZ2Q9UHY8 353 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 ZNF407Q9C0G0 2248 aa13.29□□□□□ -0.28
CSNK1D-224ENST00000584672 IGKV1-8A0A0C4DH67 115 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 PSTPIP1O43586 416 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 CDC123O75794 336 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 GOT2P00505 430 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 INHBBP09529 407 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 AOAHP28039 575 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 PCSK6P29122 969 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 SLC1A1P43005 524 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 TAS2R50P59544 299 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 EIF3EP60228 445 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 GPR85P60893 370 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 GARNL3Q5VVW2 1013 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 BBS12Q6ZW61 710 aa13.28□□□□□ -0.28
CSNK1D-224ENST00000584672 ADCK2Q7Z695 626 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms