RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 H3BNH8 94 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 ERN1O75460 977 aaKnown RBP10.92□□□□□ -0.66
TOP3A-217ENST00000584582 AP1S2P56377 157 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 RAB8AP61006 207 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 TMEM215Q68D42 235 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 LRRC70Q7Z2Q7 622 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 EPHX4Q8IUS5 362 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 RAB42Q8N4Z0 105 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 CIDECQ96AQ7 238 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-217ENST00000584582 C12orf43Q96C57 262 aaKnown RBP10.92□□□□□ -0.66
TOP3A-217ENST00000584582 HSH2DQ96JZ2 352 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 F2RL3Q96RI0 385 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 AGPAT4Q9NRZ5 378 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 ZDHHC7Q9NXF8 308 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 SCELO95171 688 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 PENKP01210 267 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-217ENST00000584582 CXCL10P02778 98 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 FABP3P05413 133 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 HTR1EP28566 365 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 MAPK9P45984 424 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 HNMTP50135 292 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 C12orf40Q86WS4 652 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 TRIM48Q8IWZ4 208 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 TCAIMQ8N3R3 496 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 STX19Q8N4C7 294 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 CELF5Q8N6W0 485 aaKnown RBP10.92□□□□□ -0.66
TOP3A-217ENST00000584582 SLC35A5Q9BS91 424 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 NLNQ9BYT8 704 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 SLC28A3Q9HAS3 691 aa10.92□□□□□ -0.66
TOP3A-217ENST00000584582 CACYBPQ9HB71 228 aaKnown RBP10.92□□□□□ -0.66
TOP3A-217ENST00000584582 DYTNA2CJ06 578 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PRRT4C9JH25 899 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 CYP17A1P05093 508 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 DDX5P17844 614 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 NAA20P61599 178 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 FAM109BQ6ICB4 259 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 Q6ZPB1 254 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TMEM145Q8NBT3 493 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 NFKBIDQ8NI38 313 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PHF10Q8WUB8 498 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 FATE1Q969F0 183 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 HSPBAP1Q96EW2 488 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF597Q96LX8 424 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 SLC6A17Q9H1V8 727 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TMEM245Q9H330 911 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TRPS1Q9UHF7 1281 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 SAMD4AQ9UPU9 718 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 HS3ST2Q9Y278 367 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 SPTBP11277 2137 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 OR52A4PA6NMU1 304 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TMX2-CTNND1H3BSU7 103 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 H7C0S8 307 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RGS5O15539 181 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 SGTAO43765 313 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 CYP7B1O75881 506 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 BMP2P12643 396 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TCF3P15923 654 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PMS2P3Q13401 168 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 XKR7Q5GH72 579 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RNF130Q86XS8 419 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RP1L1Q8IWN7 2480 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TTC29Q8NA56 475 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 NACC2Q96BF6 587 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RBM4BQ9BQ04 359 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RBM4Q9BWF3 364 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 C6orf62Q9GZU0 229 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RPS6KA6Q9UK32 745 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 MIA3Q5JRA6 1907 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PDCD11Q14690 1871 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 MID1O15344 667 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 FSHRP23945 695 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RRM2P31350 389 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 GRK3P35626 688 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 CARTPTQ16568 116 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PRAMEF14Q5SWL7 426 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 INTS11Q5TA45 600 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PRAMEF13Q5VWM6 474 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TMIGD1Q6UXZ0 262 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 DLEU7Q6UYE1 221 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 HACD2Q6Y1H2 254 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PATL1Q86TB9 770 aaKnown RBP10.91□□□□□ -0.66
TOP3A-217ENST00000584582 ADIPOR2Q86V24 386 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 CPA6Q8N4T0 437 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 C11orf65Q8NCR3 313 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 TFAP2CQ92754 450 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 FGF13Q92913 245 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 RAD51AP1Q96B01 352 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PYURFQ96I23 114 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 YIPF2Q9BWQ6 316 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 OLAHQ9NV23 265 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 PCDHB3Q9Y5E6 796 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
TOP3A-217ENST00000584582 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 A0A1W2PRB8 838 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 GAPDHSO14556 408 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 OR10H3O60404 316 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 NR2F1P10589 423 aa10.9□□□□□ -0.66
TOP3A-217ENST00000584582 DBTP11182 482 aaKnown RBP10.9□□□□□ -0.66
TOP3A-217ENST00000584582 ZNF30P17039 623 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms