RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CTSVO60911 334 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 IPO13O94829 963 aaKnown RBP14.95□□□□□ -0.02
SKA2-209ENST00000583976 CD9P21926 228 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 TNFRSF8P28908 595 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 OR1D4P47884 311 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 VSNL1P62760 191 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 TIAL1Q01085 375 aaKnown RBP eCLIP14.95□□□□□ -0.02
SKA2-209ENST00000583976 AIMP2Q13155 320 aaKnown RBP14.95□□□□□ -0.02
SKA2-209ENST00000583976 UAP1Q16222 522 aaPredicted RBP14.95□□□□□ -0.02
SKA2-209ENST00000583976 KLHL38Q2WGJ6 581 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 TTLL9Q3SXZ7 439 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 PRAMEF13Q5VWM6 474 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 FAM45BPQ6NSW5 357 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 UGT3A1Q6NUS8 523 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 KIRREL2Q6UWL6 708 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 CPNE9Q8IYJ1 553 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 FAM45AQ8TCE6 357 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 CD200R1Q8TD46 325 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 TM9SF4Q92544 642 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 DLG3Q92796 817 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 VPS39Q96JC1 886 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 CNDP1Q96KN2 507 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 OLFM1Q99784 485 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 CPNE1Q99829 537 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 RHOJQ9H4E5 214 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 ATP13A2Q9NQ11 1180 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 CUTCQ9NTM9 273 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 MTO1Q9Y2Z2 717 aaKnown RBP14.95□□□□□ -0.02
SKA2-209ENST00000583976 NFS1Q9Y697 457 aa14.95□□□□□ -0.02
SKA2-209ENST00000583976 SVILO95425 2214 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 RASGRF2O14827 1237 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 DSCR3O14972 297 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 IGHEP01854 428 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 GP5P40197 560 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 SOX8P57073 446 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 Q0VFX4 171 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 PDAP1Q13442 181 aaKnown RBP14.94□□□□□ -0.02
SKA2-209ENST00000583976 NAA30Q147X3 362 aaPredicted RBP14.94□□□□□ -0.02
SKA2-209ENST00000583976 GRTP1Q5TC63 336 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 FRMPD2BQ6IN97 320 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 PAQR3Q6TCH7 311 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 OVCH1Q7RTY7 1134 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 PARP9Q8IXQ6 854 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 PRSS58Q8IYP2 241 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 EIF1ADQ8N9N8 165 aaKnown RBP14.94□□□□□ -0.02
SKA2-209ENST00000583976 OR2L8Q8NGY9 312 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 PPP4R1Q8TF05 950 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 CYTH2Q99418 400 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 RBBP8Q99708 897 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 SELENOSQ9BQE4 189 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 CAB39LQ9H9S4 337 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 RRAGDQ9NQL2 400 aaPredicted RBP14.94□□□□□ -0.02
SKA2-209ENST00000583976 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.94□□□□□ -0.02
SKA2-209ENST00000583976 STOX2Q9P2F5 926 aaPredicted RBP14.94□□□□□ -0.02
SKA2-209ENST00000583976 SLC39A10Q9ULF5 831 aa14.94□□□□□ -0.02
SKA2-209ENST00000583976 CORO1CQ9ULV4 474 aaPredicted RBP14.94□□□□□ -0.02
SKA2-209ENST00000583976 CNTRLQ7Z7A1 2325 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 A0A087WUV0 522 aaPredicted RBP14.93□□□□□ -0.02
SKA2-209ENST00000583976 FFAR3O14843 346 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 GPR42O15529 346 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 RIPK2O43353 540 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 FDXRP22570 491 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 SKIV2L2P42285 1042 aaKnown RBP14.93□□□□□ -0.02
SKA2-209ENST00000583976 VSX2P58304 361 aaPredicted RBP14.93□□□□□ -0.02
SKA2-209ENST00000583976 YBX1P67809 324 aaKnown RBP14.93□□□□□ -0.02
SKA2-209ENST00000583976 ELOAQ14241 798 aaKnown RBP14.93□□□□□ -0.02
SKA2-209ENST00000583976 GBX1Q14549 363 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 ZNF460Q14592 562 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 RBBP7Q16576 425 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 TUBB8Q3ZCM7 444 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 FIGLAQ6QHK4 219 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 UNC5DQ6UXZ4 953 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 TRMT10CQ7L0Y3 403 aaKnown RBP14.93□□□□□ -0.02
SKA2-209ENST00000583976 ST6GALNAC3Q8NDV1 305 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 GRHL3Q8TE85 626 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 DENND1AQ8TEH3 1009 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 EEF1AKMT1Q8WVE0 214 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 C8orf44Q96CB5 159 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 ZNF285Q96NJ3 590 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 MIPEPQ99797 713 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 MCMBPQ9BTE3 642 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 TXLNGYQ9BZA5 131 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 ACSS3Q9H6R3 686 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 WDR54Q9H977 334 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 SYNPO2LQ9H987 977 aa14.93□□□□□ -0.02
SKA2-209ENST00000583976 CSMD2Q7Z408 3487 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 POC1B-GALNT4F8VUJ3 575 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 KDM1AO60341 852 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 SPRP35270 261 aaPredicted RBP14.92□□□□□ -0.02
SKA2-209ENST00000583976 ARSFP54793 590 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 SLC12A2P55011 1212 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 TAS2R39P59534 338 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 NAB1Q13506 487 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 USP10Q14694 798 aaKnown RBP14.92□□□□□ -0.02
SKA2-209ENST00000583976 GRM7Q14831 915 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 SF1Q15637 639 aaKnown RBP14.92□□□□□ -0.02
SKA2-209ENST00000583976 IGFL2Q6UWQ7 119 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 LINC00696Q6ZRV3 163 aa14.92□□□□□ -0.02
SKA2-209ENST00000583976 PIWIL4Q7Z3Z4 852 aaKnown RBP14.92□□□□□ -0.02
SKA2-209ENST00000583976 CEP97Q8IW35 865 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms