RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 C2orf80Q0P641 193 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ACOX1Q15067 660 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 QPRTQ15274 297 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ZNF284Q2VY69 593 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ZNF544Q6NX49 715 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 FAM171BQ6P995 826 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 SLC16A12Q6ZSM3 486 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 HJURPQ8NCD3 748 aaPredicted RBP10.25□□□□□ -0.77
RNF43-207ENST00000583753 PAPD5Q8NDF8 572 aaKnown RBP10.25□□□□□ -0.77
RNF43-207ENST00000583753 KAT2AQ92830 837 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 PSKH2Q96QS6 385 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ASPNQ9BXN1 380 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ACPTQ9BZG2 426 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 SLC9A8Q9Y2E8 581 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 PCDHB1Q9Y5F3 818 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 PCDHGB6Q9Y5F9 930 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 PCDHGB3Q9Y5G1 929 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 LYVE1Q9Y5Y7 322 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 FAM240BA0A1B0GVZ2 78 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 FABP12A6NFH5 140 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 FAM227AF5H4B4 570 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 WWP2O00308 870 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 PCDHGA12O60330 932 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 JRKO75564 520 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 PRSS23O95084 383 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ETFAP13804 333 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 GJA1P17302 382 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 PURAQ00577 322 aaKnown RBP10.25□□□□□ -0.77
RNF43-207ENST00000583753 MVKQ03426 396 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 EXOC3L2Q2M3D2 409 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 C5orf22Q49AR2 442 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 LIPKQ5VXJ0 399 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 FRG2Q64ET8 278 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 NOXRED1Q6NXP6 359 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 BHLHA9Q7RTU4 235 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 NRARPQ7Z6K4 114 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 DDX53Q86TM3 631 aaKnown RBP10.25□□□□□ -0.77
RNF43-207ENST00000583753 RIMKLAQ8IXN7 391 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 C10orf111Q8N326 155 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 AQP11Q8NBQ7 271 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 FOXJ1Q92949 421 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ITPKCQ96DU7 683 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 FRG2BQ96QU4 278 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 MGLLQ99685 303 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 SLC30A2Q9BRI3 323 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 GPR62Q9BZJ7 368 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 BRINP2Q9C0B6 783 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 TMEM245Q9H330 911 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 TBC1D17Q9HA65 648 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 CSNK1G1Q9HCP0 422 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ELOVL2Q9NXB9 296 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 TAS2R9Q9NYW1 312 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 SSR3Q9UNL2 185 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 TRIM64CA6NLI5 447 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 J3KTA2 159 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 GADD45GO95257 159 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ACPPP15309 386 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 CA5AP35218 305 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 TGM4P49221 684 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 GABARAPL2P60520 117 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 SMU1Q2TAY7 513 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 AGAP7PQ5VUJ5 663 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 GTF2IRD2BQ6EKJ0 949 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 SDE2Q6IQ49 451 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ERAP2Q6P179 960 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 USP30Q70CQ3 517 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 USP51Q70EK9 711 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 GTF2IRD2Q86UP8 949 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 KRT73Q86Y46 540 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 LYSMD2Q8IV50 215 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ZNF366Q8N895 744 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 ARL14EPQ8N8R7 260 aaPredicted RBP10.25□□□□□ -0.77
RNF43-207ENST00000583753 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
RNF43-207ENST00000583753 RDH12Q96NR8 316 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 TMEM121BQ9BXQ6 578 aaPredicted RBP10.25□□□□□ -0.77
RNF43-207ENST00000583753 KLHL1Q9NR64 748 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
RNF43-207ENST00000583753 COL11A1P12107 1806 aaPredicted RBP10.24□□□□□ -0.77
RNF43-207ENST00000583753 AGAP5A6NIR3 686 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 NPPAP01160 153 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 CCNYL3P0C7X3 344 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 ELNP15502 786 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 GSTM5P46439 218 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 ZNF140P52738 457 aaPredicted RBP10.24□□□□□ -0.77
RNF43-207ENST00000583753 CDH4P55283 916 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 IL18Q14116 193 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 PCBP2Q15366 365 aaKnown RBP eCLIP10.24□□□□□ -0.776e-7■■■□□ 15.4
RNF43-207ENST00000583753 NDUFA5Q16718 116 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 ZSWIM7Q19AV6 140 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 PRSS36Q5K4E3 855 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 C10orf62Q5T681 223 aaPredicted RBP10.24□□□□□ -0.77
RNF43-207ENST00000583753 BBS7Q8IWZ6 715 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 FAM9CQ8IZT9 166 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 ASCC1Q8N9N2 400 aaKnown RBP10.24□□□□□ -0.77
RNF43-207ENST00000583753 MYLIPQ8WY64 445 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 SCAMP4Q969E2 229 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 C1orf74Q96LT6 269 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 CCM2Q9BSQ5 444 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 MCMBPQ9BTE3 642 aa10.24□□□□□ -0.77
RNF43-207ENST00000583753 SLC32A1Q9H598 525 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms