RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	PIR	O00625	290 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TRAPPC3	O43617	180 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	LDB3	O75112	727 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	N4BP1	O75113	896 aa	Known RBP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	DAB1	O75553	588 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	RFPL2	O75678	378 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	AKAP3	O75969	853 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	KRT36	O76013	467 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	PMS2P2	O95744	297 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	HSPA4L	O95757	839 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	APOA4	P06727	396 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CA3	P07451	260 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CCDC192	P0DO97	292 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CXCL8	P10145	99 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SRC	P12931	536 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TYMP	P19971	482 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SAT1	P21673	171 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CENPF	P49454	3210 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TERF1	P54274	439 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	GALC	P54803	685 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TAS2R40	P59535	323 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	MYL5	Q02045	173 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SPAG1	Q07617	926 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CYP24A1	Q07973	514 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ACSM2A	Q08AH3	577 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	BFSP1	Q12934	665 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SCARB2	Q14108	478 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TMEM132D	Q14C87	1099 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CAMK4	Q16566	473 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	UPP1	Q16831	310 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	C2orf68	Q2NKX9	166 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	EPC2	Q52LR7	807 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ZNF628	Q5EBL2	1059 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TCP11X2	Q5H9J9	407 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	LRIF1	Q5T3J3	769 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	HECTD3	Q5T447	861 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ACSM2B	Q68CK6	577 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ANKRD54	Q6NXT1	300 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SASS6	Q6UVJ0	657 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	B3GNT6	Q6ZMB0	384 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	C15orf39	Q6ZRI6	1047 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	VSIG1	Q86XK7	387 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CBWD2	Q8IUF1	395 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	FAM114A1	Q8IWE2	563 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	THNSL1	Q8IYQ7	743 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	DSEL	Q8IZU8	1212 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SLC39A11	Q8N1S5	342 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	RFLNB	Q8N5W9	214 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ZBTB2	Q8N680	514 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	GPATCH11	Q8N954	259 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	AVL9	Q8NBF6	648 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	COLGALT1	Q8NBJ5	622 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	POGLUT1	Q8NBL1	392 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453		Q8NFD4	153 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	MAGEC3	Q8TD91	643 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	PTPMT1	Q8WUK0	201 aa	Predicted RBP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	TMCO6	Q96DC7	493 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	IL17F	Q96PD4	163 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	DGAT2	Q96PD7	388 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	GAD1	Q99259	594 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	PAFAH2	Q99487	392 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	KXD1	Q9BQD3	176 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	HAUS8	Q9BT25	410 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ANP32E	Q9BTT0	268 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	FUCA2	Q9BTY2	467 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	APOL6	Q9BWW8	343 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	KLHL4	Q9C0H6	718 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	NAT10	Q9H0A0	1025 aa	Known RBP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	THAP9	Q9H5L6	903 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	RABEP2	Q9H5N1	569 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	RETREG1	Q9H6L5	497 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ERVMER34-1	Q9H9K5	563 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SLC28A3	Q9HAS3	691 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	POLD4	Q9HCU8	107 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	NOX4	Q9NPH5	578 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SLC35C2	Q9NQQ7	365 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CNGB3	Q9NQW8	809 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	MARCH5	Q9NX47	278 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	GDAP2	Q9NXN4	497 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	RBAK	Q9NYW8	714 aa	Predicted RBP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SPG21	Q9NZD8	308 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ZNF224	Q9NZL3	707 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	MALT1	Q9UDY8	824 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ARMCX3	Q9UH62	379 aa	Predicted RBP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SIX4	Q9UIU6	781 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	KCNG2	Q9UJ96	466 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	ICAM5	Q9UMF0	924 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	WBP11	Q9Y2W2	641 aa	Known RBP	3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	COQ4	Q9Y3A0	265 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	CMAHP	Q9Y471	501 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	HES2	Q9Y543	173 aa		3.06	□□□□□ -1.92
MSI2-215	ENST00000582453	SF3B1	O75533	1304 aa	Known RBP eCLIP	3.05	□□□□□ -1.92	8e-7	■■■■■ 168.3
MSI2-215	ENST00000582453	LNP1	A1A4G5	178 aa		3.05	□□□□□ -1.92
MSI2-215	ENST00000582453	IFITM10	A6NMD0	228 aa		3.05	□□□□□ -1.92
MSI2-215	ENST00000582453	LRRIQ3	A6PVS8	624 aa	Predicted RBP	3.05	□□□□□ -1.92
MSI2-215	ENST00000582453	SOCS6	O14544	535 aa		3.05	□□□□□ -1.92
MSI2-215	ENST00000582453	PLRG1	O43660	514 aa	Known RBP	3.05	□□□□□ -1.92
MSI2-215	ENST00000582453	DDHD2	O94830	711 aa		3.05	□□□□□ -1.92
MSI2-215	ENST00000582453	KDM4B	O94953	1096 aa		3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms