RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 KCNE1BA0A087WTH5 132 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 TCRBV9S1A1TA0A576 114 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 CXorf49A8MYA2 514 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-220ENST00000581707 AGPSO00116 658 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 P2RX6O15547 441 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 URI1O94763 535 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-220ENST00000581707 GSTA2P09210 222 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 CSRP3P50461 194 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 KCNC4Q03721 635 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 ZNF460Q14592 562 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 ZXDCQ2QGD7 858 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-220ENST00000581707 SBSNQ6UWP8 590 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 CCDC25Q86WR0 208 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 ARHGEF39Q8N4T4 335 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 OR56A3Q8NH54 315 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 STT3BQ8TCJ2 826 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 ANKRD7Q92527 254 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 PYCR2Q96C36 320 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 THAP11Q96EK4 314 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 PHACTR1Q9C0D0 580 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 SEMA3GQ9NS98 782 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 TXNDC16Q9P2K2 825 aa18.56■□□□□ 0.56
SREBF1-220ENST00000581707 NOVA2Q9UNW9 492 aaKnown RBP18.56■□□□□ 0.56
SREBF1-220ENST00000581707 NUP210LQ5VU65 1888 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 CDC7O00311 574 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 PRPF4O43172 522 aaKnown RBP eCLIP18.55■□□□□ 0.56
SREBF1-220ENST00000581707 ZGLP1P0C6A0 271 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 CDH1P12830 882 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 SLC12A2P55011 1212 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 GPX6P59796 221 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 POU4F1Q01851 419 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 RAPSNQ13702 412 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 DSG2Q14126 1118 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 NDUFA9Q16795 377 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 CEP97Q8IW35 865 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 MIEF2Q96C03 454 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 MMABQ96EY8 250 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-220ENST00000581707 CPNE1Q99829 537 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 CRB3Q9BUF7 120 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 YIPF2Q9BWQ6 316 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 DRC3Q9H069 523 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 POPDC3Q9HBV1 291 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 ATP13A2Q9NQ11 1180 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 TRPC4Q9UBN4 977 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 FBXL4Q9UKA2 621 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 MTO1Q9Y2Z2 717 aaKnown RBP18.55■□□□□ 0.56
SREBF1-220ENST00000581707 HS3ST3B1Q9Y662 390 aa18.55■□□□□ 0.56
SREBF1-220ENST00000581707 IGLV3-12A0A075B6K2 115 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 FEZF1A0PJY2 475 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 FAM159BA6NKW6 160 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 SOCS6O14544 535 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 STATHP02808 62 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 ANXA5P08758 320 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 GRK3P35626 688 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 SLC26A3P40879 764 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 MAGEA4P43358 317 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 SLC7A5Q01650 507 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 KLC1Q07866 573 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 FAM53BQ14153 422 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 RBBP7Q16576 425 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 PPP1R3AQ16821 1122 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 VWA2Q5GFL6 755 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 KIRREL2Q6UWL6 708 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 ZDHHC24Q6UX98 284 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 VN1R4Q7Z5H5 301 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 PRSS58Q8IYP2 241 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 GALNT16Q8N428 558 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 ABHD11Q8NFV4 315 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 ANKRD49Q8WVL7 239 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 OR4K3Q96R72 315 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 SMAD5Q99717 465 aaKnown RBP18.54■□□□□ 0.56
SREBF1-220ENST00000581707 GPAMQ9HCL2 828 aa18.54■□□□□ 0.56
SREBF1-220ENST00000581707 UBR5O95071 2799 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-220ENST00000581707 A0A0A6YYC8 382 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-220ENST00000581707 NPEPPSL1A6NEC2 478 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 I3L1I5 382 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-220ENST00000581707 MASP2O00187 686 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 FOXS1O43638 330 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 LCMT2O60294 686 aaKnown RBP18.53■□□□□ 0.56
SREBF1-220ENST00000581707 ZIC2O95409 532 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-220ENST00000581707 BCL6P41182 706 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 CCR8P51685 355 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 AIMP2Q13155 320 aaKnown RBP18.53■□□□□ 0.56
SREBF1-220ENST00000581707 USP10Q14694 798 aaKnown RBP18.53■□□□□ 0.56
SREBF1-220ENST00000581707 MYBPC3Q14896 1274 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 WHAMMP3Q1A5X7 153 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 C8orf74Q6P047 294 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 HPS6Q86YV9 775 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 AMER3Q8N944 861 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 ZNF592Q92610 1267 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 TSPAN17Q96FV3 270 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 VPS50Q96JG6 964 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 LRRC1Q9BTT6 524 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 FAM129AQ9BZQ8 928 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 CLMPQ9H6B4 373 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 CAB39LQ9H9S4 337 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 CTNNAL1Q9UBT7 734 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 C3orf18Q9UK00 162 aa18.53■□□□□ 0.56
SREBF1-220ENST00000581707 PRRC2CQ9Y520 2896 aaKnown RBP18.53■□□□□ 0.56
SREBF1-220ENST00000581707 FFAR3O14843 346 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms