RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 MMABQ96EY8 250 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 TEKT5Q96M29 485 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 OLFM3Q96PB7 478 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 CYTH2Q99418 400 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ZFYVE21Q9BQ24 234 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 KRTAP4-12Q9BQ66 201 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 PLCD4Q9BRC7 762 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 CDCP1Q9H5V8 836 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 TRIM45Q9H8W5 580 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 MRPL47Q9HD33 250 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 MMP25Q9NPA2 562 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 INTS7Q9NVH2 962 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 ZDHHC3Q9NYG2 299 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 FAM153AQ9UHL3 310 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 HEY1Q9Y5J3 304 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 KLK4Q9Y5K2 254 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 PRSS21Q9Y6M0 314 aa7.2□□□□□ -1.26
SMARCE1-217ENST00000580654 EML6Q6ZMW3 1958 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 KIAA1549Q9HCM3 1950 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 A0A0A6YYC8 382 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 TRBV5-4A0A0C4DH59 114 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 A0A0U1RQJ8 604 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 CFAP99D6REC4 459 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 NPIPA2E9PIF3 369 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 NPIPA3F8WFD2 350 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 H0YGG7 62 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 I3L1I5 382 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 LIN7AO14910 233 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ACRV1P26436 265 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 PEX19P40855 299 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ITGA8P53708 1063 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ARF3P61204 181 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 WASHC5Q12768 1159 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 MESDQ14696 234 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 PDK2Q15119 407 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 POU4F3Q15319 338 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 TAF1AQ15573 450 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 SF1Q15637 639 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 HKDC1Q2TB90 917 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 CDKAL1Q5VV42 579 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 E4F1Q66K89 784 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 KAZNQ674X7 775 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ZNF449Q6P9G9 518 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 PODNL1Q6PEZ8 512 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 PRSS57Q6UWY2 283 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 B3GNT6Q6ZMB0 384 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 CAPN12Q6ZSI9 719 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 SNX20Q7Z614 316 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 YTHDF3Q7Z739 585 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 P3H2Q8IVL5 708 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ULK2Q8IYT8 1036 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 LGI4Q8N135 537 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 KIF2BQ8N4N8 673 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ZFP62Q8NB50 900 aaPredicted RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 KCTD6Q8NC69 237 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 OR2L8Q8NGY9 312 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 HEXDCQ8WVB3 486 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ULK4Q96C45 1275 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 MVB12AQ96EY5 273 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 CABS1Q96KC9 395 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 RNF157Q96PX1 679 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 SARGQ9BW04 601 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 DEFB127Q9H1M4 99 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 HAUS4Q9H6D7 363 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 CDC14AQ9UNH5 594 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 RUVBL1Q9Y265 456 aaKnown RBP7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 FAM169AQ9Y6X4 670 aa7.19□□□□□ -1.26
SMARCE1-217ENST00000580654 ARID1AO14497 2285 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 HEATR5BQ9P2D3 2071 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 PINLYPA6NC86 204 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 KRT87PA6NCN2 255 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 CLCA1A8K7I4 914 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ARHGEF33A8MVX0 844 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 PRPF4O43172 522 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 PHF1O43189 567 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 PEX1O43933 1283 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 AGTP01019 485 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 HRGP04196 525 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 GSTM1P09488 218 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 MYBL1P10243 752 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 EPXP11678 715 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 TRHRP34981 398 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 SSR1P43307 286 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 CYB561P49447 251 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ZNF140P52738 457 aaPredicted RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 GPR85P60893 370 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 GSTM4Q03013 218 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 TYRO3Q06418 890 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 EXT1Q16394 746 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 FBXL19-AS1Q494R0 122 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 FKBP15Q5T1M5 1219 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 FBXW10Q5XX13 1052 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 SLC9A4Q6AI14 798 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 ZNF585AQ6P3V2 769 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 LRRC8BQ6P9F7 803 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 PAPD4Q6PIY7 484 aaKnown RBP7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 LYPD8Q6UX82 237 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 SERPINA9Q86WD7 417 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 PAQR7Q86WK9 346 aa7.18□□□□□ -1.26
SMARCE1-217ENST00000580654 RPS19BP1Q86WX3 136 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms