RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 C12orf66Q96MD2 445 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 ZNF778Q96MU6 729 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 VPS35Q96QK1 796 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 TAAR9Q96RI9 348 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 MAP3K3Q99759 626 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 CMKLR1Q99788 373 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 TIMM29Q9BSF4 260 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 HGH1Q9BTY7 390 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 FSD1LQ9BXM9 530 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 DPH1Q9BZG8 443 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 SPRY4Q9C004 299 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 POFUT1Q9H488 388 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 PRDM13Q9H4Q3 707 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 XKR8Q9H6D3 395 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 ASB8Q9H765 288 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 ZMAT4Q9H898 229 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 SLC40A1Q9NP59 571 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 IMP3Q9NV31 184 aaKnown RBP3.86□□□□□ -1.79
DDX42-211ENST00000580108 KCTD5Q9NXV2 234 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 H2AFY2Q9P0M6 372 aaPredicted RBP3.86□□□□□ -1.79
DDX42-211ENST00000580108 PDP2Q9P2J9 529 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 LCMT1Q9UIC8 334 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 CRLS1Q9UJA2 301 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 AMFRQ9UKV5 643 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 PLAGL1Q9UM63 463 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 GUCA1BQ9UMX6 200 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 TMA7Q9Y2S6 64 aaKnown RBP3.86□□□□□ -1.79
DDX42-211ENST00000580108 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.86□□□□□ -1.79
DDX42-211ENST00000580108 PKP3Q9Y446 797 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 NBASA2RRP1 2371 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 MN1Q10571 1320 aaPredicted RBP3.86□□□□□ -1.79
DDX42-211ENST00000580108 HECTD1Q9ULT8 2610 aa3.86□□□□□ -1.79
DDX42-211ENST00000580108 SPTA1P02549 2419 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 ANKRD12Q6UB98 2062 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 FLNBO75369 2602 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 KIR2DS5A0A0G2JLQ3 304 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 A0A0G2JNG1 304 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 TCRBV7S3A2A0A539 114 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 OR6C74A6NCV1 312 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 C5orf60A6NFR6 353 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 IQCF5A8MTL0 148 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 B4E171 279 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 KIR2DS3K7RE56 304 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 MASP2O00187 686 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 BTN3A3O00478 584 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 HOXA3O43365 443 aaPredicted RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 LIASO43766 372 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 SLC28A2O43868 658 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 VEGFDO43915 354 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 OR1I1O60431 355 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 KATNA1O75449 491 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 ANXA9O76027 345 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 KIAA0754O94854 1291 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 SCAF4O95104 1147 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 APOL3O95236 402 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 IPO7O95373 1038 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 IFNB1P01574 187 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 TPBGLP0DKB5 382 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 MTHFD1P11586 935 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 MSH3P20585 1137 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 IDSP22304 550 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 CXCR5P32302 372 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 FOXN2P32314 431 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 PTPN7P35236 360 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 RPL22P35268 128 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 TSPAN7P41732 249 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 CAPZBP47756 277 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 LMAN1P49257 510 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 VPS41P49754 854 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 CLK3P49761 638 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 KPNA2P52292 529 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 UCNP55089 124 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 CCZ1BP86790 482 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 CCZ1P86791 482 aaPredicted RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 MC2RQ01718 297 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 RHDQ02161 417 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 CHAF1BQ13112 559 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 SQSTM1Q13501 440 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 KIR2DS5Q14953 304 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 TRIP13Q15645 432 aaPredicted RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 OASLQ15646 514 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 DEFB110Q30KQ9 67 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 DEFB109BQ30KR1 87 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 ZNF658BQ4V348 819 aaPredicted RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 LDLRAP1Q5SW96 308 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 DCAF12Q5T6F0 453 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 AGAP9Q5VTM2 703 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 ITPRIPL1Q6GPH6 555 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 FAM199XQ6PEV8 388 aaPredicted RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 WDR74Q6RFH5 385 aaPredicted RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 ABRAXAS1Q6UWZ7 409 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 BZW1Q7L1Q6 419 aaKnown RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 TAS2R42Q7RTR8 314 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 AMZ2Q86W34 360 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 SLC13A5Q86YT5 568 aaPredicted RBP3.85□□□□□ -1.79
DDX42-211ENST00000580108 KLHDC8BQ8IXV7 354 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 CFAP206Q8IYR0 622 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 KRT222Q8N1A0 295 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 NXPE1Q8N323 547 aa3.85□□□□□ -1.79
DDX42-211ENST00000580108 C2orf73Q8N5S3 287 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms