RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 PDCD2Q16342 344 aaPredicted RBP10.31□□□□□ -0.76
SS18-213ENST00000579640 AMZ1Q400G9 498 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 NKAIN2Q5VXU1 208 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 FIGLAQ6QHK4 219 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 PIGWQ7Z7B1 504 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 TRIM73Q86UV7 250 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 OR7G3Q8NG95 312 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 WDR48Q8TAF3 677 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 BAHD1Q8TBE0 780 aaPredicted RBP10.31□□□□□ -0.76
SS18-213ENST00000579640 WDR20Q8TBZ3 569 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 SELENOMQ8WWX9 145 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 THAP11Q96EK4 314 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 C19orf60Q96EN9 201 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 ELAC2Q9BQ52 826 aaKnown RBP10.31□□□□□ -0.76
SS18-213ENST00000579640 CHRNA10Q9GZZ6 450 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 RHBGQ9H310 441 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 LRRN3Q9H3W5 708 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 MEAF6Q9HAF1 191 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 PPT2Q9UMR5 302 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 HEATR5BQ9P2D3 2071 aa10.31□□□□□ -0.76
SS18-213ENST00000579640 USP34Q70CQ2 3546 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 SLC28A1O00337 649 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 FOXE1O00358 373 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 PIP5K1BO14986 540 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 TOX3O15405 576 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 MAP3K7O43318 606 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 SH3BP5O60239 455 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 SKAP2O75563 359 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 CPNE6O95741 557 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 RPLP0P05388 317 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 AHRP35869 848 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 PIK3CBP42338 1070 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 SCTRP47872 440 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 LSSP48449 732 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 ARFIP2P53365 341 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 RPS15AP62244 130 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 BTKQ06187 659 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 CSTF3Q12996 717 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 GKAP1Q5VSY0 366 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 TMEM71Q6P5X7 295 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 EPGNQ6UW88 154 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 TRIM46Q7Z4K8 759 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 FAM20CQ8IXL6 584 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 DDIASQ8IXT1 998 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 GBP7Q8N8V2 638 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 BCAS4Q8TDM0 211 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 TGM7Q96PF1 710 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 TRAPPC9Q96Q05 1148 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 NUF2Q9BZD4 464 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 SPNS1Q9H2V7 528 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 BRF2Q9HAW0 419 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 RIC8BQ9NVN3 520 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 SEMA5BQ9P283 1151 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 DCTN4Q9UJW0 460 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 ZNF490Q9ULM2 529 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 A0A0G2JND7 137 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 ANKDD1BA6NHY2 528 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 NDUFAB1O14561 156 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 HAT1O14929 419 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 RGS14O43566 566 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 OR1F1O43749 312 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 CBFA2T3O75081 653 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 PDYNP01213 254 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 PCNAP12004 261 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 CSF2RBP32927 897 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 HTR6P50406 440 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 LIMK1P53667 647 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 GFERP55789 205 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 PPP1CAP62136 330 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 CCL7P80098 99 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 MEF2AQ02078 507 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 NHLH1Q02575 133 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 ILKQ13418 452 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 ABRAXAS2Q15018 415 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 RBBP5Q15291 538 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 XKR7Q5GH72 579 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 TCHHL1Q5QJ38 904 aaPredicted RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 STPG1Q5TH74 334 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 FCRL6Q6DN72 434 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 FAM92BQ6ZTR7 304 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 ACAD11Q709F0 780 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 MAVSQ7Z434 540 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 PRSS42Q7Z5A4 293 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 KMT5CQ86Y97 462 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 C19orf47Q8N9M1 422 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 MFSD9Q8NBP5 474 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 RFWD2Q8NHY2 731 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 ZNF473Q8WTR7 871 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 THOC1Q96FV9 657 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 TCTN2Q96GX1 697 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 MAELQ96JY0 434 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 MAP3K3Q99759 626 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 CCDC28BQ9BUN5 200 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 TMEM120AQ9BXJ8 343 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 TUBB1Q9H4B7 451 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 KCNK13Q9HB14 408 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 NMRK1Q9NWW6 199 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 BTRCQ9Y297 605 aa10.3□□□□□ -0.76
SS18-213ENST00000579640 SNRNP200O75643 2136 aaKnown RBP10.3□□□□□ -0.76
SS18-213ENST00000579640 A0A1W2PQM1 296 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms