RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 CXorf49A8MYA2 514 aaPredicted RBP14.13□□□□□ -0.15
SS18-212ENST00000579061 K7EM74 188 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 WISP3O95389 354 aaPredicted RBP14.13□□□□□ -0.15
SS18-212ENST00000579061 FBLP22087 321 aaKnown RBP14.13□□□□□ -0.15
SS18-212ENST00000579061 STX2P32856 288 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 GRK3P35626 688 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 CASRP41180 1078 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 PGDP52209 483 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 SOX8P57073 446 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 OCA2Q04671 838 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 NAB1Q13506 487 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 DSG2Q14126 1118 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 TRADDQ15628 312 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 ZXDCQ2QGD7 858 aaPredicted RBP14.13□□□□□ -0.15
SS18-212ENST00000579061 HKDC1Q2TB90 917 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 DCAF10Q5QP82 559 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 ADAMTSL2Q86TH1 951 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 CCDC25Q86WR0 208 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 CEP97Q8IW35 865 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 MMGT1Q8N4V1 131 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 MNS1Q8NEH6 495 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 ABHD11Q8NFV4 315 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 VPS50Q96JG6 964 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 GPR22Q99680 433 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 LRRC1Q9BTT6 524 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 DERL2Q9GZP9 239 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 DRC3Q9H069 523 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 CTSFQ9UBX1 484 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 ZNF282Q9UDV7 671 aaPredicted RBP14.13□□□□□ -0.15
SS18-212ENST00000579061 ZNF451Q9Y4E5 1061 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 OARD1Q9Y530 152 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 MAU2Q9Y6X3 613 aa14.13□□□□□ -0.15
SS18-212ENST00000579061 AGPSO00116 658 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 P2RX6O15547 441 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 GUCA1CO95843 209 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 ANXA5P08758 320 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 ZGLP1P0C6A0 271 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 CDH1P12830 882 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 NR1D1P20393 614 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 SPRP35270 261 aaPredicted RBP14.12□□□□□ -0.15
SS18-212ENST00000579061 SLC26A3P40879 764 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 CCR8P51685 355 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 SLC7A5Q01650 507 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 GUCY2DQ02846 1103 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 ZNF460Q14592 562 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 GRTP1Q5TC63 336 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 CEP128Q6ZU80 1094 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 VN1R4Q7Z5H5 301 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 PLD3Q8IV08 490 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 DTWD1Q8N5C7 304 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 METTL27Q8N6F8 245 aaPredicted RBP14.12□□□□□ -0.15
SS18-212ENST00000579061 TEX19Q8NA77 164 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 CLEC1AQ8NC01 280 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 CAMKVQ8NCB2 501 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 OR4K1Q8NGD4 311 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 STT3BQ8TCJ2 826 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 ANKRD49Q8WVL7 239 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 ALKBH8Q96BT7 664 aaKnown RBP14.12□□□□□ -0.15
SS18-212ENST00000579061 MIEF2Q96C03 454 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 TM4SF19Q96DZ7 209 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 SMAD5Q99717 465 aaKnown RBP14.12□□□□□ -0.15
SS18-212ENST00000579061 LRRC4CQ9HCJ2 640 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 ZDHHC18Q9NUE0 388 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 C5AR2Q9P296 337 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 CTNNAL1Q9UBT7 734 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 IKZF3Q9UKT9 509 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 SH2B3Q9UQQ2 575 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 MTO1Q9Y2Z2 717 aaKnown RBP14.12□□□□□ -0.15
SS18-212ENST00000579061 MAP4K5Q9Y4K4 846 aa14.12□□□□□ -0.15
SS18-212ENST00000579061 NPEPPSL1A6NEC2 478 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 CDC7O00311 574 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 PCDH17O14917 1159 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 FOXS1O43638 330 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 PIAS1O75925 651 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 PDGFAP04085 211 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 STMN1P16949 149 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 HNMTP50135 292 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 FOXL2P58012 376 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 USP10Q14694 798 aaKnown RBP14.11□□□□□ -0.15
SS18-212ENST00000579061 KBTBD12Q3ZCT8 623 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 CTAGE3PQ8IX95 158 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 TBC1D19Q8N5T2 526 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 FDCSPQ8NFU4 85 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 PYCR2Q96C36 320 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 MMABQ96EY8 250 aaPredicted RBP14.11□□□□□ -0.15
SS18-212ENST00000579061 OR4K3Q96R72 315 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 TGIF2Q9GZN2 237 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 SOX17Q9H6I2 414 aaPredicted RBP14.11□□□□□ -0.15
SS18-212ENST00000579061 MKKSQ9NPJ1 570 aaPredicted RBP14.11□□□□□ -0.15
SS18-212ENST00000579061 ATP13A2Q9NQ11 1180 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 C14orf105Q9NVL8 296 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 SCN3AQ9NY46 2000 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 GPR83Q9NYM4 423 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 HS3ST3B1Q9Y662 390 aa14.11□□□□□ -0.15
SS18-212ENST00000579061 TRBC2A0A5B9 178 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 ESYT3A0FGR9 886 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 H0YIG0 161 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 SOCS6O14544 535 aa14.1□□□□□ -0.15
SS18-212ENST00000579061 LCMT2O60294 686 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms