RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 FTSJ1Q9UET6 329 aa10.71□□□□□ -0.69
CDK5RAP3-204ENST00000577664 ZNF225Q9UK10 706 aa10.71□□□□□ -0.69
CDK5RAP3-204ENST00000577664 UTP20O75691 2785 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 KCNE1BA0A087WTH5 132 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 IGKV1-8A0A0C4DH67 115 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 A0A1W2PQM1 296 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SERTM1A2A2V5 107 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 UBFD1O14562 309 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CCNT2O60583 730 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PRAMEF4O60810 478 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 WDR47O94967 919 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ESRRBO95718 433 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OTCP00480 354 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MSL3P1P0C860 447 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 AMD1P17707 334 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ALDH4A1P30038 563 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ARRB2P32121 409 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ACADVLP49748 655 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ATP1A2P50993 1020 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OR1D5P58170 312 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ABCE1P61221 599 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SH3BP2P78314 561 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 E2F1Q01094 437 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OCRLQ01968 901 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZNF33BQ06732 778 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LCP2Q13094 533 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PRKAA1Q13131 559 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 STX3Q13277 289 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 BIRC2Q13490 618 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CHI3L2Q15782 390 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ARL13AQ5H913 290 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 C10orf62Q5T681 223 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PRAMEF9Q5VWM5 478 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PRAMEF13Q5VWM6 474 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TMEM71Q6P5X7 295 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NXPE4Q6UWF7 544 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 EFL1Q7Z2Z2 1120 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TEX9Q8N6V9 391 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OR4D9Q8NGE8 314 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 IFI44Q8TCB0 444 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MGARPQ8TDB4 240 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RSC1A1Q92681 617 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 EXT2Q93063 718 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NEIL2Q969S2 332 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 GRAMD1AQ96CP6 724 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LIN37Q96GY3 246 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SEC16BQ96JE7 1060 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NSUN5Q96P11 429 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CCDC3Q9BQI4 270 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 C20orf27Q9GZN8 174 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ABCG4Q9H172 646 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LRRN3Q9H3W5 708 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 NOL11Q9H8H0 719 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PELI2Q9HAT8 420 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 EML4Q9HC35 981 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MLXIPLQ9NP71 852 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CIDEBQ9UHD4 219 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SNX7Q9UNH6 387 aa10.7□□□□□ -0.7
CDK5RAP3-204ENST00000577664 RP1P56715 2156 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CPED1A4D0V7 1026 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 WDR91A4D1P6 747 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 OR2A25A4D2G3 310 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 H0YIV9 168 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PPP6CO00743 305 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CLGNO14967 610 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CAPN5O15484 640 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 DUX1O43812 170 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CPNE6O95741 557 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ANKRD34CP0C6C1 535 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 C1GALT1C1LP0DN25 315 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MYF5P13349 255 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 UGT2B7P16662 529 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 POLR2CP19387 275 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 BGNP21810 368 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CMPK1P30085 196 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 HNF4AP41235 474 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 GRIA3P42263 894 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SLC1A6P48664 564 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CDH13P55290 713 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PCBP4P57723 403 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CCL7P80098 99 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 DAB2P98082 770 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZFP36L1Q07352 338 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 BST1Q10588 318 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 TRAF3Q13114 568 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LAPTM5Q13571 262 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SF1Q15637 639 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 FBXO48Q5FWF7 155 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 CFAP157Q5JU67 520 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 KIAA1614Q5VZ46 1190 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PRSS42Q7Z5A4 293 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 C17orf64Q86WR6 236 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 ZNF761Q86XN6 746 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 KMT5CQ86Y97 462 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 LAS2Q8IYD9 372 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 AGAP11Q8TF27 550 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 SLC5A11Q8WWX8 675 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 KLHL6Q8WZ60 621 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 MOCOSQ96EN8 888 aa10.69□□□□□ -0.7
CDK5RAP3-204ENST00000577664 PTCD3Q96EY7 689 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms