RNA–Protein interactions for RNA: ENST00000577268.1

CCDC178-206, Transcript of coiled-coil domain containing 178, humanhuman

TSL 5

Gene CCDC178, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-206ENST00000577268 PRAMEP78395 509 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 SMC1AQ14683 1233 aaKnown RBP2.12□□□□□ -2.07
CCDC178-206ENST00000577268 SIX1Q15475 284 aaPredicted RBP2.12□□□□□ -2.07
CCDC178-206ENST00000577268 TBCEQ15813 527 aaPredicted RBP2.12□□□□□ -2.07
CCDC178-206ENST00000577268 CCDC184Q52MB2 194 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 XKR4Q5GH76 650 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 SPATA1Q5VX52 437 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 ITPRIPL1Q6GPH6 555 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 C11orf63Q6NUN7 778 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 BRINP3Q76B58 766 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 FCRLAQ7L513 359 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 HEATR4Q86WZ0 1026 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 C17orf53Q8N3J3 647 aaPredicted RBP2.12□□□□□ -2.07
CCDC178-206ENST00000577268 AVL9Q8NBF6 648 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 AFAP1L1Q8TED9 768 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 U2AF1L4Q8WU68 220 aaKnown RBP2.12□□□□□ -2.07
CCDC178-206ENST00000577268 CCDC47Q96A33 483 aaKnown RBP2.12□□□□□ -2.07
CCDC178-206ENST00000577268 DGAT2Q96PD7 388 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 KCNMB3Q9NPA1 279 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 BLOC1S4Q9NUP1 217 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 NSMCE4AQ9NXX6 385 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 HACL1Q9UJ83 578 aa2.12□□□□□ -2.07
CCDC178-206ENST00000577268 IGHV3-16A0A0C4DH30 117 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TRBV4-1A0A0J9YWV2 114 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 A0A1B0GTH9 108 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 ANKUB1A6NFN9 424 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TSPY2A6NKD2 308 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TXNL1O43396 289 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 DDX58O95786 925 aaKnown RBP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 CLEC3BP05452 202 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 OR2T7P0C7T2 308 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TSPY3P0CV98 308 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TSPY8P0CW00 308 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 UMPSP11172 480 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 GP1BBP13224 206 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 PTPN3P26045 913 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 OAS2P29728 719 aaKnown RBP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TSPAN7P41732 249 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 ZNF131P52739 623 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 RIDAP52758 137 aaKnown RBP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 KRT83P78385 493 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 SRPXP78539 464 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TSPY1Q01534 308 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 WASHC5Q12768 1159 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 G3BP1Q13283 466 aaKnown RBP eCLIP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TRA2AQ13595 282 aaKnown RBP eCLIP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TRIM29Q14134 588 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 UGT3A2Q3SY77 523 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TIMM50Q3ZCQ8 353 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 CCDC158Q5M9N0 1113 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 MFSD4BQ5TF39 518 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 ARMC3Q5W041 872 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 C16orf54Q6UWD8 224 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 LGI2Q8N0V4 545 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 NKAIN3Q8N8D7 197 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TDRD7Q8NHU6 1098 aaKnown RBP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 CHURC1Q8WUH1 139 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 ITLN1Q8WWA0 313 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 SSMEM1Q8WWF3 244 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 KCNK15Q9H427 330 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TSPY26PQ9H489 355 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TLE6Q9H808 572 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 PREBQ9HCU5 417 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 IRAK4Q9NWZ3 460 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 NKIRAS2Q9NYR9 191 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 Q9UF83 564 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 IL17BQ9UHF5 180 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 ODF2LQ9ULJ1 636 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 NAP1L2Q9ULW6 460 aaPredicted RBP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 CRYL1Q9Y2S2 319 aa2.11□□□□□ -2.07
CCDC178-206ENST00000577268 MAGED1Q9Y5V3 778 aaPredicted RBP2.11□□□□□ -2.07
CCDC178-206ENST00000577268 TRBV5-5A0A0J9YX44 114 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 FSD2A1L4K1 749 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 SYNDIG1LA6NDD5 238 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 A8MZ25 164 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 O00370 1275 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 PLOD3O60568 738 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 PRAMEF11O60813 436 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 ZBED4O75132 1171 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 VENTXO95231 258 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 CD4P01730 458 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 QDPRP09417 244 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 HSPA1AP0DMV8 641 aaKnown RBP2.1□□□□□ -2.07
CCDC178-206ENST00000577268 HSPA1BP0DMV9 641 aaKnown RBP2.1□□□□□ -2.07
CCDC178-206ENST00000577268 RARGP13631 454 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 PSMA3P25788 255 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 PKLRP30613 574 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 PEX19P40855 299 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 GSK3BP49841 420 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 SUOXP51687 545 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 ZNF133P52736 654 aaPredicted RBP2.1□□□□□ -2.07
CCDC178-206ENST00000577268 CASP6P55212 293 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 MPP1Q00013 466 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 CALD1Q05682 793 aaKnown RBP2.1□□□□□ -2.07
CCDC178-206ENST00000577268 KLC1Q07866 573 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 UPP1Q16831 310 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 SYT14P1Q58G82 188 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 RILPL1Q5EBL4 403 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 CFAP58Q5T655 872 aa2.1□□□□□ -2.07
CCDC178-206ENST00000577268 KLHL35Q6PF15 583 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms