RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LGI4Q8N135 537 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 CHDHQ8NE62 594 aaPredicted RBP12.62□□□□□ -0.39
COPS3-214ENST00000577246 PPHLN1Q8NEY8 458 aaKnown RBP12.62□□□□□ -0.39
COPS3-214ENST00000577246 OR9A1PQ8NGU1 263 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 ASB5Q8WWX0 329 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 SIGLEC12Q96PQ1 595 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 OR2A5Q96R48 311 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 PANX2Q96RD6 677 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 DMRTA2Q96SC8 542 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 TRIM51Q9BSJ1 452 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 MMP25Q9NPA2 562 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 PCDHA13Q9Y5I0 950 aa12.62□□□□□ -0.39
COPS3-214ENST00000577246 FAM221AA4D161 298 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 SOWAHDA6NJG2 315 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 H3BMM5 538 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 PFDN6O15212 129 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 NDUFS3O75489 264 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 WISP2O76076 250 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 SP1P08047 785 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 CD99P14209 185 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 RPS3P23396 243 aaKnown RBP eCLIP12.61□□□□□ -0.39
COPS3-214ENST00000577246 FDFT1P37268 417 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 NAP1L1P55209 391 aaKnown RBP12.61□□□□□ -0.39
COPS3-214ENST00000577246 ABATP80404 500 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 PRDX1Q06830 199 aaKnown RBP12.61□□□□□ -0.39
COPS3-214ENST00000577246 TSTA3Q13630 321 aaPredicted RBP12.61□□□□□ -0.39
COPS3-214ENST00000577246 FASTKQ14296 549 aaKnown RBP12.61□□□□□ -0.39
COPS3-214ENST00000577246 SEMA3AQ14563 771 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 SYT16Q17RD7 645 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 MEI1Q5TIA1 1274 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 FCRLBQ6BAA4 426 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 TMEM211Q6ICI0 200 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 SPINK14Q6IE38 97 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 SLC25A25Q6KCM7 469 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 GALNTL5Q7Z4T8 443 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 ADCK2Q7Z695 626 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 CRLF3Q8IUI8 442 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 CCDC170Q8IYT3 715 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 ARHGEF39Q8N4T4 335 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 TAB3Q8N5C8 712 aaPredicted RBP12.61□□□□□ -0.39
COPS3-214ENST00000577246 OLFM1Q99784 485 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 TMEM121Q9BTD3 319 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 ANKRD10Q9NXR5 420 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 RUVBL2Q9Y230 463 aaKnown RBP12.61□□□□□ -0.39
COPS3-214ENST00000577246 TCAF1Q9Y4C2 921 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 CPAMD8Q8IZJ3 1885 aa12.61□□□□□ -0.39
COPS3-214ENST00000577246 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
COPS3-214ENST00000577246 MTORP42345 2549 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 IGHV3-20A0A0C4DH32 117 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 GABRR3A8MPY1 467 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 MYO1CO00159 1063 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 CD3EAPO15446 510 aaKnown RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 MATN4O95460 622 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 NSA2O95478 260 aaKnown RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 CATP04040 527 aaKnown RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 STIP1P31948 543 aaKnown RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 MAT1AQ00266 395 aaKnown RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 MAPKAPK3Q16644 382 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 CES4AQ5XG92 561 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 ICE2Q659A1 982 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 ZNF425Q6IV72 752 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 SUSD1Q6UWL2 747 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 LANCL3Q6ZV70 420 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 ANKRD37Q7Z713 158 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 PCGF5Q86SE9 256 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 LDB1Q86U70 411 aaPredicted RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 POGLUT1Q8NBL1 392 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 LPAR4Q99677 370 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 ZNF559Q9BR84 538 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 HES7Q9BYE0 225 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 P2RY12Q9H244 342 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 LRFN1Q9P244 771 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 TNFRSF10DQ9UBN6 386 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 TAC3Q9UHF0 121 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
COPS3-214ENST00000577246 MED13LQ71F56 2210 aa12.6□□□□□ -0.39
COPS3-214ENST00000577246 IGKV1-8A0A0C4DH67 115 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 A0A0U1RQJ8 604 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 KRT87PA6NCN2 255 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 KIF5CO60282 957 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 SLC25A12O75746 678 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 FAM155BO75949 473 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 IPO7O95373 1038 aaKnown RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 IGFBP2P18065 325 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 IL10P22301 178 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 HRH2P25021 359 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 CHRNB4P30926 498 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 PTGS2P35354 604 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 CYLC1P35663 651 aaPredicted RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 XCR1P46094 333 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 PNLIPRP1P54315 467 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 GDF10P55107 478 aa12.59□□□□□ -0.39
COPS3-214ENST00000577246 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 YBX1P67809 324 aaKnown RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 ACTN3Q08043 901 aaPredicted RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
COPS3-214ENST00000577246 C3P1Q6ZMU1 363 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms